Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1067 ATGCCACCATCATCAGAAACAACTTATTCCATTGATGCACAAAAAACCAACTTCAACCAAACTTACCAAACTACCCACATATTCAGATCAAAATTACCAGACATACCCATCAACAATACTATTCCTCTCCACACTTATTGCTTTCAAAAGCTCCCCCAAGTCTTCCACCGCCCATGTCTCATCACGGGTGATGGCAAGACTTACACCTACGGTGATATCCACCGCGCTTCTAGAAGCTTTGCCGTGGGCCTCTTCAACCTTGGAATCCGCAAAGGTGATGTCATCATGATCCTACTCCCAAACTCTCCAGAATTCGTGTTCTCCTTTTGGGCTGCTTCTATGCTTGGTGCAGTTTCCACCACTGCCAACCCTTCTTACACCTCCGTTGAAATCACAAAGCAGCTCAAAGCCTCCAAGGCCAAAATCGTCATTACACGTTCCATGCACGTGCACAAGCTCAAACAAGAACAAGAAAACAGCTTTATAGTGATAACTGTAGACAATCCACCAGAGAAGTGCATGAGCTACTCGGTGGTTTCCAGCATGGAAGGGAAGCTGCCGGAGGTGGATATCGACCCTGACGACATGGTGGCACTGCCATTTTCCTCCGGCACGACGGGGCTGCCGAAGGGTGTGGTTCTGACACACAGAAGTCTGATAACAAACGTGGCTCAACAAGTTGAGGGAGAGAACCCTAACTTGCACCTGAAGGAAGAGGATGTAGTGCTTTGCGTTCTACCATTGTTTCACATTTACGCACTACACTCGGTGATGTTGTGCTCTATGAGAGTAGGGTGTAGGGTGTTGCTTATGGAGAAGTTTGAGATGAGGGTGATGTTGGAGCTTGTGGAAAAGCACAGGGTTTCGGTTTTGATGGCGGTACCGGCGTTGGTGGCAGCACTTTCAAAGAACCCGGCGGTGGAGGAGTATGACCTTAGGTCCATGCGGATGGTGATGTCGGGAGGTGCCCCACTTGCAGAGAATATTGAGGAGGCTTTTCATAGTAGATTGCCTCAAGCAATCCTTCGACAGGCTTTAGGAATGACAGAATCAGGACCTGTAATATCGATGTCACTAAGTTTTGCAAAGAATCCAATGACAACCAAGTTAAGATCATGCGGTACTGTTATTAGAAATGCAGAGTTGAAGATCATTGATCTTTTGACAGGCTCTTCTCTCCCTTATAATACTTCGGGTGAGATTTGCATCCGAGGTCAACAAATTATGAAAGGATACTTGAATGATGAGAGGGCCACAGCAGAAGCTATTGATGAAGAGGGTTGGCTTCATACCGGTGATATTGGCTATGTAGATGATGATGATGAGATTTTCATTGTTGATAGACTCAAGGAACTCATCAAATTTAAAGGCTTCCAGGTGGCTCCGGCAGAACTTGAAGGAATTCTCATGAGCCACCCTTCCATTAAAGACGCAGCTGTTGTCCCGCAAAAAGATGATGTAGCTGGTGAAGTTCCAGTTGCTTTTGTGGTGAGGTCATCAAATGATCCTATTACTGAAGATGCTGTCAAGGAATTTATAGCTAAACAGGTAGTATTTTACAAGAGACTACATAGAATAATTTTTATTGACGCAATCCCAAAATCTTCAATCGGCAAGATATTAAGAAAAGAACTCAAAGCAACTCTATCTAATTAG 1656 0.4493 MPPSSETTYSIDAQKTNFNQTYQTTHIFRSKLPDIPINNTIPLHTYCFQKLPQVFHRPCLITGDGKTYTYGDIHRASRSFAVGLFNLGIRKGDVIMILLPNSPEFVFSFWAASMLGAVSTTANPSYTSVEITKQLKASKAKIVITRSMHVHKLKQEQENSFIVITVDNPPEKCMSYSVVSSMEGKLPEVDIDPDDMVALPFSSGTTGLPKGVVLTHRSLITNVAQQVEGENPNLHLKEEDVVLCVLPLFHIYALHSVMLCSMRVGCRVLLMEKFEMRVMLELVEKHRVSVLMAVPALVAALSKNPAVEEYDLRSMRMVMSGGAPLAENIEEAFHSRLPQAILRQALGMTESGPVISMSLSFAKNPMTTKLRSCGTVIRNAELKIIDLLTGSSLPYNTSGEICIRGQQIMKGYLNDERATAEAIDEEGWLHTGDIGYVDDDDEIFIVDRLKELIKFKGFQVAPAELEGILMSHPSIKDAAVVPQKDDVAGEVPVAFVVRSSNDPITEDAVKEFIAKQVVFYKRLHRIIFIDAIPKSSIGKILRKELKATLSN* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1067 551 Pfam AMP-binding enzyme C-terminal domain 464 539 IPR025110 -
Ahy13g1067 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 26 547 - -
Ahy13g1067 551 Gene3D - 18 449 IPR042099 -
Ahy13g1067 551 CDD 4CL 32 545 - -
Ahy13g1067 551 Pfam AMP-binding enzyme 57 455 IPR000873 -
Ahy13g1067 551 Gene3D - 450 551 IPR045851 -
Ahy13g1067 551 SUPERFAMILY Acetyl-CoA synthetase-like 41 549 - -
Ahy13g1067 551 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Ahy13g1067 551 PANTHER 4-COUMARATE--COA LIGASE 3 26 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1067 Ahy-Chr13 12012626 12016703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1067 24 462 Monolignol Biosynthesis Gene Families AT1G65060 64.865 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1067 K01904 - gmx:547930 720.309