Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1066 ATGGCACCATCATTAGTAGCAACTTATTCCGTTGATCCAAAAAAAACCAACTTCATCAACCAAAGTTACCAAACTACCCACATCTTCAAATCAAAATTACCAGACATACCTATCAACAATACCATTCCCCTCCACACTTATTCGTTTCAAAAACTCCCCCAAGTCTACAACCGCCCGTGTCTCATCACGAGCGATGGCAAGGAGTACACCTATGGTGATGTCCACCGCGCATCTAGAAGCTTGGCCATGGGCCTTTTCAACCTTGGAATCCGGAAAGGTGACATCATAATGATCCTACTCCCAAACTCGCCGGAATTCGTGTTCTCCTTTTGGGCTGCTTCTATGCTGGGGGCAGTTTCGACCCTTGCCAACCCTTCTTACACATCTCTTGAAATCACGAAGCAGCTCAAAGCCACCAAGGCCAAAATCGTCATCACACATGCCATGCACGTGCATAAGCTCAAACAAGATCAACAAGAAGAAAACACATTCACAGTGATAACTGTGGACAAGCCACCAGAGAAGTGCATGAGTTTCTCGACGGTTTCCAGAAATGAAGGAAAGCTGCCAGAGGTGGATATTAACCCTGACGACATGGTGACACTGCCATTTTCCTCCGGCACGACGGGGTTATCAAAGGGTGTGATTCTAACACACCGGAGTCTGGTTACAAACGTGGCTCAGCAGGTTGAGGGAGAGAACCCTAACTTGCATCTGAAGGAAGAGGATGTAGTGCTTTGTGTGCTACCGTTGTTCCACATTTACGCACTACACTGTGTGATGTTATGCTCTATGAGAGTAGGGTGTAAGGTGTTGCTTATGGAGAAGTTTGAGATGAGGGCGATGTTGGAAGTTGTGGAGAAGCAGAGGGTATCAGTAGTGATGGCAGTGCCGCCGTTGGTGGTGGCACTGTCAAAGAACCCGGCAGTGGAGGAGTATGAGCTTAGCTCCATCAGGATGGTGATGTCTGGAGGTGCCTCGCTTGCAAATGACATCGAGGATGCTTTTCATAGTAGGTTGCCTCAAGCTATCCTTCGACAGGCTTTGGGAATGACAGAATCAGGACCAGTGATATCAATGTCATTAAGTTTTGCAAAATATCCAATGACAACTAAATTAGGATCATGCGGTACTGTCATCAGAAATGCAGAAATGAAGATTATTGACCCTCTAACAGGCTCTTCTCTCTTTTATAATACTCCGGGTGAAATTTGTATCCGAGGTCAACAAATTATGAAAGGATACCTGAATAATGAGAAGGCGACAGCAGAAGCTATTGATGAAGAGGGTTGGCTTCATACAGGTGACATTGGGTATGTGGATGATGATGATGAGCTTTTCGTTGTTGATAGACTCAAGGAGCTCATCAAATTCAAAGCCTTTCAGGTTGCTCCGGTAGAACTTGAAGTCCTTCTTATGACCCACCCTTCCATTCAAGATGCTGCTGTTGTCCCACAACAAGATGATGTAGCTGGTGAAGTTCCAGTTGCTTTTGTGGTGAGGTCATCAAATGACCCTATTACTGAAGATGCTGTAAAGGACTTTATAGCTAAACAGGTAGTATTTTACAAGAGGCTACATAGAGTAATTTTCATTGACGCAATCCCAAAATCTTCAATGGGCAAGATATTAAGAAAAGAACTCAAAGCAAAGCTCGCTAGCTACCATTAA 1671 0.4476 MAPSLVATYSVDPKKTNFINQSYQTTHIFKSKLPDIPINNTIPLHTYSFQKLPQVYNRPCLITSDGKEYTYGDVHRASRSLAMGLFNLGIRKGDIIMILLPNSPEFVFSFWAASMLGAVSTLANPSYTSLEITKQLKATKAKIVITHAMHVHKLKQDQQEENTFTVITVDKPPEKCMSFSTVSRNEGKLPEVDINPDDMVTLPFSSGTTGLSKGVILTHRSLVTNVAQQVEGENPNLHLKEEDVVLCVLPLFHIYALHCVMLCSMRVGCKVLLMEKFEMRAMLEVVEKQRVSVVMAVPPLVVALSKNPAVEEYELSSIRMVMSGGASLANDIEDAFHSRLPQAILRQALGMTESGPVISMSLSFAKYPMTTKLGSCGTVIRNAEMKIIDPLTGSSLFYNTPGEICIRGQQIMKGYLNNEKATAEAIDEEGWLHTGDIGYVDDDDELFVVDRLKELIKFKAFQVAPVELEVLLMTHPSIQDAAVVPQQDDVAGEVPVAFVVRSSNDPITEDAVKDFIAKQVVFYKRLHRVIFIDAIPKSSMGKILRKELKAKLASYH* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1066 556 Pfam AMP-binding enzyme C-terminal domain 467 542 IPR025110 -
Ahy13g1066 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 551 - -
Ahy13g1066 556 PANTHER 4-COUMARATE--COA LIGASE 3 27 551 - -
Ahy13g1066 556 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Ahy13g1066 556 CDD 4CL 33 548 - -
Ahy13g1066 556 Pfam AMP-binding enzyme 57 458 IPR000873 -
Ahy13g1066 556 Gene3D - 453 554 IPR045851 -
Ahy13g1066 556 SUPERFAMILY Acetyl-CoA synthetase-like 42 554 - -
Ahy13g1066 556 Gene3D - 19 452 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1066 Ahy-Chr13 11988396 11994154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1066 25 473 Monolignol Biosynthesis Gene Families AT1G65060 61.454 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1066 K01904 - gmx:100790396 712.99