Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1065 ATGGCACCATCATTAGCAGCAACTTATTCCGTTGATCCAAAAGAAACCAACTTCATCAACAAAAGTTACCAAACTACCCACATCTTCAAATCAAAATTACCAGACATACCCATCAACAATACCATTCCTCTCCACACTTATTCGTTTCAAAAGCTCCCCCAAGTCTACAACCGCCCGTGTCTCATCACGAGCGATGGCAAGGAGTACACCTATGGTGATGTCCACCGCGCTTCTAGAAGCTTGGCATTGGGCCTTTTCAACCTTGGAATCCGCAAAGGTGACATCATAATGATCCTACTCCCAAACTCGCCGGAATTCGTGTTCTCCTTTTGGGCTGCTTCTATGCTGGGCGCAGCTTCCACCCTTGCCAATCCTTCTTACACATCTCTTGAAATCACGAAGCAGCTCAAAGCCACCAAAGCCAAAATCGTCATCACACATGCCATGCACGTGCATAAGCTCAAACAAGATCAACCAGAAGAAAACACATTCACAGTGATAACTGTGGACAAGCCACCAGAGAAGTGCATGAGTTTCTCGACGGTTTCCAGAAATGAAGGAGAGCTGCCAGAGGTGGATATTAACCCTGACGACATGGTGACACTGCCATTTTCGTCCGGCACGACGGGGTTATCAAAGGGTGTGGTTCTAACACACCGGAGTCTGGTAACAAACGTGGCTCAGCAGGTGGAGGGAGAGAACCCTAACTTGCACCTGAAGGAAGAGGATGTAGTGCTTTGTGTGTTACCCTTGTTTCACATTTACGCACTACACTGTGTGATGTTATGCTCTATGAGAGTAGGGTGTAAGGTGTTGCTTATGGAGAAGTTTGAGATGAGGGCGATGTTGGAAGTTGTGGAGAAGCACAGGGTATCAGTAGTGATGGCAGTGCCGCCGTTGGTGGTGGCACTGTCAAAGAACCCGGCAGTGGAGGAGTATGAGCTTAGCTCCATCCGGATGGTGATGTCTGGAGGTGCCTCTCTTGCAAATGACATTGAGGAGGCTTTTCGTAGTAGGTTGCCTCAAGCAATCCTTCGACAGGCTTTAGGAATGACAGAATCAGGACCAGTGATATCAATGTCATTAAGTTTTGCAAAGTATCCAATGAAAACTAAATCAGGATCGTGTGGCAGTGTCATTAGAAATGCAGAAATGAAGATCATTGATCCTCTAACTGGCTCTTCTCTCCCTCGTAATATGTCGGGTGAAATTTGCATCCGAGGTCCACAAATTATGAAAGGATACCTGAATAATGAGAAGGCGACAGCAGAAGCTATTGATGAAGAGGGTTGGCTTCATACAGGTGACATTGGGTATGTGGATGATGATGATGAGCTTTTCGTTGTTGATAGACTCAAGGAGCTCATCAAATTCAAAGCCTTTCAGGTTGCTCCGGTAGAACTTGAAGTCCTTCTTATGACCCACCCTTCCATTCAAGATGCTGCTGTTGTCCCGCAAAAAGACGATGTAGCTGGTGAAGTTCCAGTTGCTTTTGTGGTGAGGTCATCAAATGATTCTATTACTGAAGATGCTGTGAAAGACTTTATAGCTAAACAGGTAGTATTTTACAAGAGGCTACATAGAGTAATTTTCATTGACGCAATTCCAAAATCTTCAATCGGCAAGATATTAAGAAAAGAACTCAAAGCAAAGCTCGCTAGCTACTATTAA 1671 0.4512 MAPSLAATYSVDPKETNFINKSYQTTHIFKSKLPDIPINNTIPLHTYSFQKLPQVYNRPCLITSDGKEYTYGDVHRASRSLALGLFNLGIRKGDIIMILLPNSPEFVFSFWAASMLGAASTLANPSYTSLEITKQLKATKAKIVITHAMHVHKLKQDQPEENTFTVITVDKPPEKCMSFSTVSRNEGELPEVDINPDDMVTLPFSSGTTGLSKGVVLTHRSLVTNVAQQVEGENPNLHLKEEDVVLCVLPLFHIYALHCVMLCSMRVGCKVLLMEKFEMRAMLEVVEKHRVSVVMAVPPLVVALSKNPAVEEYELSSIRMVMSGGASLANDIEEAFRSRLPQAILRQALGMTESGPVISMSLSFAKYPMKTKSGSCGSVIRNAEMKIIDPLTGSSLPRNMSGEICIRGPQIMKGYLNNEKATAEAIDEEGWLHTGDIGYVDDDDELFVVDRLKELIKFKAFQVAPVELEVLLMTHPSIQDAAVVPQKDDVAGEVPVAFVVRSSNDSITEDAVKDFIAKQVVFYKRLHRVIFIDAIPKSSIGKILRKELKAKLASYY* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1065 556 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Ahy13g1065 556 CDD 4CL 33 548 - -
Ahy13g1065 556 Gene3D - 19 452 IPR042099 -
Ahy13g1065 556 PANTHER 4-COUMARATE--COA LIGASE 3 27 551 - -
Ahy13g1065 556 SUPERFAMILY Acetyl-CoA synthetase-like 41 554 - -
Ahy13g1065 556 Pfam AMP-binding enzyme C-terminal domain 467 542 IPR025110 -
Ahy13g1065 556 Gene3D - 453 554 IPR045851 -
Ahy13g1065 556 Pfam AMP-binding enzyme 57 458 IPR000873 -
Ahy13g1065 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1065 Ahy-Chr13 11949608 11953297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1065 1 520 Monolignol Biosynthesis Gene Families AT1G51680 54.820 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1065 K01904 - gmx:100790396 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1065 13 11949608 11953297 Ahy13g1065 13 11949608 11953297 ECH