Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1001 ATGATTGATATGGGTTCTTCATCAGTAATAGACGGTGAAGTTACACTTCCAGGATTCAGGTTTCACCCTACTGAAGAAGAGCTCCTTGATTTCTATCTCAAGAACATGGTCGTTGGAAAGAAGCTCCGTTTCGATGTCATAGGCTTCCTCAACATCTATCACCATGATCCCTGGGACTTGCCAGGGTTGGCGAAGGTAGGAGAGAGGGAATGGTATTTCTTTGTGCCTCGGGACAGAAAGCATGGAACCGGGGGAAGGCCAAACCGGACCACCGAGAAAGGGTTTTGGAAAGCAACCGGTTCGGACCGTAAGATCGTTACCTTGTCTGATCCGAAGCGCATCATTGGATTGAGGAAGACACTGGTTTTCTACGAGGGAAGAGCTCCACGTGGATCCAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACAATAGCCCCTTGCCTAAGGACATAGTACTATGCAAGATATATAGGAAGGCGACTTCGTTGAAAGTGTTGGAGCAAAGAGCAGCAATAGAGGAAGAGATGAAGCAAATGGTAGGTTCCCCTGAATCTACACCTTCCTCCACAGACACCATGTCCTATGAAGAACAACAACAGAATCAGAATCAGAATCTGCAATTGTTACCAACACAACATGTTGTTACTAAGAAAGAGGTTGAAGCTGAAGTTGAAGAGGAAAAAATGGTACATGTTACATTGACAACAACAAAGCAAGAAAACAAGGACACAACAAAGAACAATAAAAGTAGTTGTTGTGGTAACACAAACACTAACACTAACACAAGTAGTCTTCAATTGCCATTTGGGAAGGACAAAATCCCAGAGCTTCAAATGCCTATGATGATCACTGATTGGACCCAAGACACATTTTGGGCTCAATTGAATAGTCCATGGCTCCAAAACTATACCTACTCCAACATATTAAACTTCTAG 942 0.4363 MIDMGSSSVIDGEVTLPGFRFHPTEEELLDFYLKNMVVGKKLRFDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDRKHGTGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGSKTDWVMNEYRLPDNSPLPKDIVLCKIYRKATSLKVLEQRAAIEEEMKQMVGSPESTPSSTDTMSYEEQQQNQNQNLQLLPTQHVVTKKEVEAEVEEEKMVHVTLTTTKQENKDTTKNNKSSCCGNTNTNTNTSSLQLPFGKDKIPELQMPMMITDWTQDTFWAQLNSPWLQNYTYSNILNF* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1001 313 MobiDBLite consensus disorder prediction 240 269 - -
Ahy13g1001 313 ProSiteProfiles NAC domain profile. 15 161 IPR003441 GO:0003677|GO:0006355
Ahy13g1001 313 SUPERFAMILY NAC domain 9 161 IPR036093 GO:0003677|GO:0006355
Ahy13g1001 313 MobiDBLite consensus disorder prediction 179 202 - -
Ahy13g1001 313 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Ahy13g1001 313 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 313 - -
Ahy13g1001 313 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 13 313 - -
Ahy13g1001 313 MobiDBLite consensus disorder prediction 183 202 - -
Ahy13g1001 313 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1001 Ahy-Chr13 11001429 11003714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1001 13 306 NAC Transcription Factor Family AT2G17040 57.823 1.33e-115 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy13g1001 NAM 1.50E-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1001 - - adu:107477264 570.852