Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0998 ATGATTAGTACCAAGAAAATGATCCAAATTGCAAGTAAGTGGCAGAGACAAGCTGCAAAGCAGAGGAAGAGGATCCAATGGCGAAAGGGTCAAGAAAATTATGTGTCGAAAGAGGAAGGGTTCGGCGGCGCGTGGGCGACGAAGGCAGAGAAGGGTCACTTTGTTGTGTATAGCACAGATAAGAGGCGATTCGTGCTTCCATTGGTGTATTTGAGCAACAAAATCTTCATAGAGCTATTCAAGTTGGCTGAAGAAGAATTTGGTCTATGTAGCAATGTGCCTCTAATGTTGCCATTTGATGCAACACTAATTGAATACGTAATTACCTTGGTAGAAGGGAGTGTAGCTAAGGATCTTGAGGAAGCTCTCTTGATTTCAATTGCAAATCGTCGATGCTACTCATATTTTGATGTTAATCATCATGAATTATATAATAACAACAGCCAGCAATGGTTATGCAGTTTTTGA 468 0.4081 MISTKKMIQIASKWQRQAAKQRKRIQWRKGQENYVSKEEGFGGAWATKAEKGHFVVYSTDKRRFVLPLVYLSNKIFIELFKLAEEEFGLCSNVPLMLPFDATLIEYVITLVEGSVAKDLEEALLISIANRRCYSYFDVNHHELYNNNSQQWLCSF* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0998 155 Pfam Auxin responsive protein 13 110 IPR003676 GO:0009733
Ahy13g0998 155 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 155 IPR003676 GO:0009733
Ahy13g0998 155 PANTHER AUXIN-RESPONSIVE PROTEIN FAMILY, PUTATIVE-RELATED 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0998 Ahy-Chr13 10955127 10955594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0998 47 111 Calmodulin-binding Proteins AT4G34750 34.848 1.83e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0998 - - adu:107477309 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0998 13 10955127 10955594 Ahy13g0998 13 10955127 10955594 ECH