Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0920 ATGCTTTGTCCACCAATCATTCAAGTGGCATTATGTTATAGCATATCCTTTTATCTATATATATGTTCATGGTTGCAAACATTTAGCAGCAGCACAAGTCATTCACATCCTAAATCACAAGAAACTCAAATACTTGCATCTTATTTACAAGTCATTTGTAAAACTAGTCTTTCTTCAACACATAAAAAAATGGGTTTTCGGTTATCTGGTATCGTAAGAAAGGCATCATTTACTTCATCTTCAAAAGCTATGGAAGTGCCAAAGGGTTATCTTGCAGTTTATGTTGGAGAGAAAATGAAGCGATTTGTGATCCCTTTATCATACTTGAACCAGCCTTCATTTCAAGATTTGCTAAGTGAAGCTGAGGAAGAATTTGGGTATGATCATCCAATGGGTGGCCTCACAATTCCTTGTGAAGAAAATATGTTTTTAGATATCACTTCTTGCTTGAGTTGA 456 0.3509 MLCPPIIQVALCYSISFYLYICSWLQTFSSSTSHSHPKSQETQILASYLQVICKTSLSSTHKKMGFRLSGIVRKASFTSSSKAMEVPKGYLAVYVGEKMKRFVIPLSYLNQPSFQDLLSEAEEEFGYDHPMGGLTIPCEENMFLDITSCLS* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0920 151 Pfam Auxin responsive protein 70 150 IPR003676 GO:0009733
Ahy13g0920 151 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 71 151 IPR003676 GO:0009733
Ahy13g0920 151 PANTHER AUXIN-INDUCED PROTEIN 6B 71 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0920 Ahy-Chr13 9819301 9820024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0920 85 151 Calmodulin-binding Proteins AT3G43120 52.239 8.53e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0920 K14488 - aip:110269930 153.295