Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0856 ATGGAATGCGTGAGAATCCAGAGCACCTTGTCTCATAGGAAGAATTGGAAATATGATGTGTTTGTGAGTTTCAGAGGCGAGACTCGCTTCAACTTCACCGATCATCTTTTTGCTGCTCTCCACAGACACGGCGTACTTGCCTTCAAGGATGATACAAAAATCGAGAAAGGAGGACCTATATCAGCAGGGCTTGTGCAAGCTATTGAAGGATCACAGGTTCTGATTGTGGTCTTCTCTATCAACTATGCTTCCTCTACATGGTGCTTGCAAGAACTCGCAAACATAGCTGATTGCATTCAAATCCCAGGACACACTGTTCTGCCAGTTTTCTATGATGTGAGTCCAACTGAGGTGAGAAGGCAAAGTGGGAAATTTGAAAAAGCATTTATGAAACATGAAGAGAGATTCAAAGATGATGCAGAGATGATGGAGCAAGTGGCAAGATGGAGGGGAGCTCTAACACAAGTAGCCAATCTCTCTGGCTGGGATGTGAAGAAGGATAAGTCACAATCTGCTGAGATTGAAAAAATTGTCAAAGCGGTAACAAACATATTGAGTCCCAAACCATCATCAAGTCTATCTAATGATGTAGTTGGGGTGTACTCCCATTTAGAAGAACTAGAAAAGCTTCTAGTTTTGGACTCGCATGATGATGTTCGAGTTTTAGGCATTTGTGGAATGGGTGGCATAGGAAAGTCAACTCTTACCACCATTTTATATGAAAAGATCTCTCATCAATACGACATTTCATGCTTTATGGATGATGTAAGCAAAACTTATGCAGATTGTGGTCCACTTGGTGTGAAAAAGCAACTTCTTTGTCAAGCTTTCGTGGAAGAAGAATTTCTAATATGCAATCTTTCGGCAGCAACTAATTTGATTCAAAATAATTTATGCCATAGAAAGGTTCTCATAGTTCTGGATAATGTTGATCAGGGGATTCAGTTGGAGAAGTTGGCTTTAAAACGGGAATGGCTAAGTAGAGGGAGCAGAATAATCATAATTTCTAGAGATGAACATATATTGAGAGAGCATGGAGTGGATGATGTTTACAAAGTTCAACTCTTAAATGATGAGAATGCTCTCCAATTGTTTTGTAGAAAAGCTTTCAAATGTAACCATGTTATAGAAGGTTATGAAAGCCTGACAAATTCTGCATTAACATATGCTAATGGACTGCCATTAGCAATTAAAGTATTGGGTTCTTTTTTATTTGGCCGAAGTATATCCGAGTGGAGGAGTGCTTTGGTTAGATTGAGAGAAAACCCAACAAAAGATATTATGGATGTGTTACGAATAAGTTATGATGGACTTGAGGATATGGAAAAGGAAATGTTTCTTGATATTGCATGTTTTTTTTTCTAA 1365 0.3875 MECVRIQSTLSHRKNWKYDVFVSFRGETRFNFTDHLFAALHRHGVLAFKDDTKIEKGGPISAGLVQAIEGSQVLIVVFSINYASSTWCLQELANIADCIQIPGHTVLPVFYDVSPTEVRRQSGKFEKAFMKHEERFKDDAEMMEQVARWRGALTQVANLSGWDVKKDKSQSAEIEKIVKAVTNILSPKPSSSLSNDVVGVYSHLEELEKLLVLDSHDDVRVLGICGMGGIGKSTLTTILYEKISHQYDISCFMDDVSKTYADCGPLGVKKQLLCQAFVEEEFLICNLSAATNLIQNNLCHRKVLIVLDNVDQGIQLEKLALKREWLSRGSRIIIISRDEHILREHGVDDVYKVQLLNDENALQLFCRKAFKCNHVIEGYESLTNSALTYANGLPLAIKVLGSFLFGRSISEWRSALVRLRENPTKDIMDVLRISYDGLEDMEKEMFLDIACFFF* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0856 454 Gene3D - 14 183 IPR035897 -
Ahy13g0856 454 PRINTS Disease resistance protein signature 221 236 - -
Ahy13g0856 454 PRINTS Disease resistance protein signature 297 311 - -
Ahy13g0856 454 PRINTS Disease resistance protein signature 390 404 - -
Ahy13g0856 454 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Ahy13g0856 454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
Ahy13g0856 454 Pfam TIR domain 17 195 IPR000157 GO:0007165
Ahy13g0856 454 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 453 - -
Ahy13g0856 454 SMART till_3 17 159 IPR000157 GO:0007165
Ahy13g0856 454 Gene3D - 184 351 IPR027417 -
Ahy13g0856 454 Gene3D - 355 439 IPR042197 -
Ahy13g0856 454 Pfam NB-ARC domain 203 425 IPR002182 GO:0043531
Ahy13g0856 454 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 453 IPR044974 GO:0006952
Ahy13g0856 454 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 162 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0856 Ahy-Chr13 9043433 9047337 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0856 198 453 WRKY Transcription Factor Family AT5G45050 35.496 6.72e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0856 - - ahf:112737043 898.271