Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0855 ATGACGGCGATGGCAATGACGGCAGCAGGACCAAACCTCTTTGTCGTGCGGTTTTCTTCTGCTGTCTTGTGTGAAGATTTTTGTTTCTCTCTTCTTTTTTTTCTTGTTCTTTCTAGGTCACATTCTGCTGAAATTGAAAAAATTGTCAAAACAGTGACCAAGATATTGGGTCCCAGATCATCATCAAGTCTATCTAATGATATAGTTGGGATGGAGTTCCCTCTACAAAAACTAGGAAAGCTTCTAGTTTTGGACTCAGATGATGATGTTCGAGTTGTAGGGATTTGTGGAATGGGTGGTATAGGAAAAACAACTCTTGCTAGCAGATTATATGAAAAAATCTCTTATCAGTATGATGTTTCATGCTTTATGGATGATGTAAGTAAAACATATAGAGATTGTGGTTCACTTGGTATGAAAAAGCAGCTTCTTTGTCCAGCTTTCATGGAAGAAGATTCTCTAATATGCAATATTTTAATGGCAGATAATTTGATTGAAAATATGTTACACGATAGAAAGGTTCTGATAGTTTTGGATAATGTTGATCAGAGAATTCAGTTGGAGAAGTTGGCTTTAAAACGGGAATGGTTAGGTAGAGGGAGTAGAATAATCATAGTTTCTAGAGATGAGCATATATTGACAGAGTATGGAGCGGATGAAGTTTTCAAAGTTCCGCTCTTAAATGATGAGAATGCTCTCCAATTGTTTTGCAGAAAAGCTTTCAAATGTAATCATGTTGCAAAAGATTATGAAGGCCTCACAGATTCTGCATTAGCATATGCTAATGGACTTCCTTTAGCAATTAAAGTATTGGGCTCATTTTTGTTTGGGCGAGATGTCTCTGAATGGAGTAGTGCATTGGTTAGACTAAAAGAAACTCCAACAAAAGATATTATGGATGTGCTTCGAATCAGTTTTGATGGACTTGAGGATCCGGAAAAAGAAATATTTCTTGATATTGCCTGTTTTTTTCCCAATGACATTGAAAACTATGTAAAAGATATTTTACGTATTCGAGGATTCCATCCTGATAATGGTATAAAAGTTCTCATTGAAAAATCACTCATAACCCGTGATCGGTGGAAGATCACTATGCACGATTTGTTGAGAGACTTGGGAAGAAGTATTGTTCGAGAAAAATCACCCAAAAAACCGAGAAAGTGGAGCAGGTTATGGAATCATAAGGATCTAAGCAATGTCTTGCGAGAAAACAAGCCAGCAGAGAATGTTGAAGCCATAGTTTTGCCAACAAATGATGAAATAAGAGAAGAGTTGTCACTAAAAGCTTTATCAAAAATGAGTCGCCTAAAGTTACTCAAACTTGGCCAAGTGAAAGTGAATTTCTCAGGCAAGCTGCATTTTCTTTCTAATGAGTTGGGATATCTTTCTTGGAAAGAATATCCTTTCACATGTTTGCCATCAAGATTTCAACCAACTCAACTCGTTAAATTAATCCTACGTTATAGTAACGTCAAAGAACTCTGGAAGGGAATAAAGGTATAG 1503 0.3646 MTAMAMTAAGPNLFVVRFSSAVLCEDFCFSLLFFLVLSRSHSAEIEKIVKTVTKILGPRSSSSLSNDIVGMEFPLQKLGKLLVLDSDDDVRVVGICGMGGIGKTTLASRLYEKISYQYDVSCFMDDVSKTYRDCGSLGMKKQLLCPAFMEEDSLICNILMADNLIENMLHDRKVLIVLDNVDQRIQLEKLALKREWLGRGSRIIIVSRDEHILTEYGADEVFKVPLLNDENALQLFCRKAFKCNHVAKDYEGLTDSALAYANGLPLAIKVLGSFLFGRDVSEWSSALVRLKETPTKDIMDVLRISFDGLEDPEKEIFLDIACFFPNDIENYVKDILRIRGFHPDNGIKVLIEKSLITRDRWKITMHDLLRDLGRSIVREKSPKKPRKWSRLWNHKDLSNVLRENKPAENVEAIVLPTNDEIREELSLKALSKMSRLKLLKLGQVKVNFSGKLHFLSNELGYLSWKEYPFTCLPSRFQPTQLVKLILRYSNVKELWKGIKV* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0855 500 Gene3D - 226 310 IPR042197 -
Ahy13g0855 500 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 62 491 - -
Ahy13g0855 500 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 62 491 IPR044974 GO:0006952
Ahy13g0855 500 Pfam NB-ARC domain 78 296 IPR002182 GO:0043531
Ahy13g0855 500 PRINTS Disease resistance protein signature 261 275 - -
Ahy13g0855 500 PRINTS Disease resistance protein signature 431 447 - -
Ahy13g0855 500 PRINTS Disease resistance protein signature 168 182 - -
Ahy13g0855 500 PRINTS Disease resistance protein signature 92 107 - -
Ahy13g0855 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 320 IPR027417 -
Ahy13g0855 500 Pfam Leucine Rich Repeat 480 499 IPR011713 -
Ahy13g0855 500 Gene3D - 45 222 IPR027417 -
Ahy13g0855 500 SUPERFAMILY "Winged helix" DNA-binding domain 297 401 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0855 Ahy-Chr13 9037031 9042273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0855 89 499 WRKY Transcription Factor Family AT5G45050 33.487 2.16e-67 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0855 - - ahf:112772043 680.633