Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0850 ATGACGAGCATAGTGAAGGAGATCCTGGCCAGCCCGATTCAGATGGCTGACACGGTCTCCAAGATGGCGGAAGAGGCGCAAAATTTCCGCAGCGATTGCCTCGACATCAAGGCCAAAACCGATAAGCTGGCCGCCCTCCTCCGCCAAGCCGCCAGGAACAGCAACGACTTGTACGAGAGGCCGACGCGCCGGATCATCGAGGACACCGAGCAGGTCCTCGACAAGGCCCTCATTCTCGTCGATAAATGCCGCGCCAACACCTTCATCAAACGCCTCTTCACCATCATCCCCACCACCGCACTCAAAAAAATATCCATGCAGTTGGAAAACTCCATCGGCGACGTCCAGTGGCTCCTCCGCGTCTCCGCCTCCGCAGACGAGCGCGACGACGAGTACCTCGGACTCCCTCCAATCGCCTCCAACGAGCCCATCCTCTGCCTCATCTGGGAACAAATCGCAAACCTCCTCTCAAACGGCTCCGTGGAGGAACGCTCCGACGCCGCAGCCTCCCTTGTTTCCCTGGCTCGCGACAACGACCGTTACGGCAAACTCATCCTGGAAGAAGGCGGCGTTCCCCCTCTTCTAAAACTCTTGAAGGAAGGCAAGTTAGAAGGGCAACAGAACGCAGCAAGAGCCATCGGTTTACTCGGGAAGGATCCAGAGAGCGTGGAGCACATCGTTAACGCCGGCGTTTCCTCCGTGTTCGCCAAAATCCTGAAAGACGGTCACATGAAGGTTCAAATTGAGGTGGCTTGGGCAATTTCTGAATTAGCAGCGAATCACCCAAAGTGCCAAGATCATTTCTCACAGAACAATTGCATAAGGTTGCTGGTTAGCCATCTGGCTTTCGAAACCATTCAAGAGCACAGTAAATACGCCGTTGTCAACAAGCATAAGATGATGAATTCAAATCAGGATCACTTCCCCTCTCATCCCATGGGAGCCAACCAAGCAAGTACACAGATGCAGAATTTGGTTAATGCCGTTAAGGGTAACCAACCCACAGTTCCAGCAATGACGGATCATACCAGTAACATTAACCCAAAGGTGGTTAGTGATGGCGGTGGAAATATGAATATGAATACTATAACAGGGACGAGTAGTATCGGCGGGAGGGAGTATGAGGACCCCAATACTAAGGCGGAGATGAAGGCAATGGCAGCTAGAGCCTTATGGCAGCTCTGTAAAGGAAACCTCTCCATTTGCAACAACATAACAGAATCACGTGCTCTTCTCTGTTTTGCGGTTCTCTTAGAGAAAGGCACGGATGAGCTTCGTAGATACTCAGCTCTGGCCTTGATGGAGATAACTGCCGTGGCAGAGGAACACCCCGATCTCAGACGCTCCGCCTTCAAACCGACTTCCCCGGCGGCCAAAGCCGTGGTGGAGCAGTTCCTCAACGTCATCAAGAAAGGAGACAATAGCGATCTGCTCATACCGTGCGTCAGAGCCGTTGGAAATCTGGCAAGGACGTTCAGAGCCACGGAGACAAGGTTCATAGAGCCGTTGGTGAAGCTTCTAGATGAAAGAGAACCGGAAGTTTCAGTGGAAGCTGTGATTGCGCTTAACAAATTCGCTTGTACGGATAACTTCCTGCACAACACGCGCAGCGCCATAATCGAAGCTGGTGGCGCAAAGCACTTGGTCCAGCTGGTTTATTTCGCCGAGCAGTCGGTGCAGATTCCTTCGGTGATTCTTTTGTGTTATGTGGCGTTGCATGTGCCCAAGAGTGAGGCTCTTGCGCAAGAAGATGTTCCTATTGTTCTTGAATGGTGCACCAAGCAGGGGCATTTGATGGCTGACCCTGACATCGAAGCGCTCTTGCCAGAAGCAAAGAGCCGCTTGGAACTCTATCAATCAAGAGCAACAAGGGCATTCTATTCTGTTAATTAA 1893 0.5203 MTSIVKEILASPIQMADTVSKMAEEAQNFRSDCLDIKAKTDKLAALLRQAARNSNDLYERPTRRIIEDTEQVLDKALILVDKCRANTFIKRLFTIIPTTALKKISMQLENSIGDVQWLLRVSASADERDDEYLGLPPIASNEPILCLIWEQIANLLSNGSVEERSDAAASLVSLARDNDRYGKLILEEGGVPPLLKLLKEGKLEGQQNAARAIGLLGKDPESVEHIVNAGVSSVFAKILKDGHMKVQIEVAWAISELAANHPKCQDHFSQNNCIRLLVSHLAFETIQEHSKYAVVNKHKMMNSNQDHFPSHPMGANQASTQMQNLVNAVKGNQPTVPAMTDHTSNINPKVVSDGGGNMNMNTITGTSSIGGREYEDPNTKAEMKAMAARALWQLCKGNLSICNNITESRALLCFAVLLEKGTDELRRYSALALMEITAVAEEHPDLRRSAFKPTSPAAKAVVEQFLNVIKKGDNSDLLIPCVRAVGNLARTFRATETRFIEPLVKLLDEREPEVSVEAVIALNKFACTDNFLHNTRSAIIEAGGAKHLVQLVYFAEQSVQIPSVILLCYVALHVPKSEALAQEDVPIVLEWCTKQGHLMADPDIEALLPEAKSRLELYQSRATRAFYSVN* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0850 630 Gene3D - 3 121 IPR036537 GO:0007166
Ahy13g0850 630 PANTHER ARMADILLO REPEAT ONLY 1 1 626 - -
Ahy13g0850 630 MobiDBLite consensus disorder prediction 335 373 - -
Ahy13g0850 630 PANTHER ARMADILLO REPEAT ONLY 4 1 626 - -
Ahy13g0850 630 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Ahy13g0850 630 SUPERFAMILY ARM repeat 149 591 IPR016024 -
Ahy13g0850 630 Gene3D - 370 607 IPR011989 -
Ahy13g0850 630 Gene3D - 141 302 IPR011989 -
Ahy13g0850 630 SMART arm_5 454 490 IPR000225 GO:0005515
Ahy13g0850 630 SMART arm_5 532 572 IPR000225 GO:0005515
Ahy13g0850 630 SMART arm_5 398 438 IPR000225 GO:0005515
Ahy13g0850 630 SMART arm_5 219 259 IPR000225 GO:0005515
Ahy13g0850 630 SMART arm_5 177 218 IPR000225 GO:0005515
Ahy13g0850 630 MobiDBLite consensus disorder prediction 335 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0850 Ahy-Chr13 8985021 8987653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0850 152 295 U-box Gene Family AT1G23030 26.389 7.24e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0850 - - gmx:100807066 883.248