Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0832 ATGGGAAGGTCACCTTGCTGTGAGAAAGCACACACAAACAAAGGTGCATGGACGAAGGAAGAAGATGACAGGCTCATATCTTACATTAGAGCTCATGGTGAGGGTTGCTGGAGATCCCTTCCTAAAGCGGCGGGCCTTCTCCGGTGCGGCAAGAGCTGCCGCCTCCGCTGGATCAACTATCTCCGCCCTGACCTCAAAAGAGGCAACTTCACTGAAGAAGAAGATGAACTCATCATCAAACTCCACAGTCTCCTTGGTAACAAGTGGTCGCTTATAGCTGGAAGATTGCCAGGGAGAACAGACAATGAGATAAAGAATTATTGGAACACACACATAAGAAGGAAGCTTTTGAGCAGAGGAATTGACCCTGCAACTCATAGGCCTCTCAATGATTCTTCTGCTTCACATCATCATCACAACAACCAAGAACAACAACAACAACAACAACAACAACAACCATCTTCTCTTGTTGCAGCAGCCACAACCACCACCATATCTTTTGCTTCTTCTGTTTCTGCTTCTGCTTCTGCTGTTAAACAAGAACAAGATACTATTACTACTACTACTGCTACTACCACTACTAGTGCTACTTGCAACGCAAACATGTTTGGGATTATGGAGAAGAAGAACAAGAAGGATTATTCAAAGGGATCATCAATGGAAAGGTGCCCTGACTTGAATCTTGAGTTGACAATTAGTCCTCCACGCCATCTTGATGAACCTGATCACCAGAAATTCAGTGGAATAGAGAGATCCCCTTGCTTTGTTTGCAGCTTGGGTTTGCAGAACAGCAAGGATTGCCGGTGTGGATTCGCCACTAATGCTAATGCTAATGGTGGCACTAATAGTAATGGCACCACCACCACCACCACCACTGCTACTGGTTCTGGTTATGATTTCTTGGGCTTGAAAACAGGTAGTGTTTGGGATTACAGAAGCTTGGAAATGAAGTGA 954 0.4507 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNDSSASHHHHNNQEQQQQQQQQQPSSLVAAATTTTISFASSVSASASAVKQEQDTITTTTATTTTSATCNANMFGIMEKKNKKDYSKGSSMERCPDLNLELTISPPRHLDEPDHQKFSGIERSPCFVCSLGLQNSKDCRCGFATNANANGGTNSNGTTTTTTTATGSGYDFLGLKTGSVWDYRSLEMK* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0832 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Ahy13g0832 317 CDD SANT 69 112 IPR001005 -
Ahy13g0832 317 Gene3D - 69 156 - -
Ahy13g0832 317 CDD SANT 16 61 IPR001005 -
Ahy13g0832 317 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy13g0832 317 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Ahy13g0832 317 PANTHER TRANSCRIPTION REPRESSOR MYB4 1 273 - -
Ahy13g0832 317 SMART sant 66 114 IPR001005 -
Ahy13g0832 317 SMART sant 13 63 IPR001005 -
Ahy13g0832 317 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy13g0832 317 Gene3D - 14 66 - -
Ahy13g0832 317 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 273 - -
Ahy13g0832 317 MobiDBLite consensus disorder prediction 139 158 - -
Ahy13g0832 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Ahy13g0832 317 MobiDBLite consensus disorder prediction 122 158 - -
Ahy13g0832 317 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy13g0832 317 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0832 Ahy-Chr13 8725459 8727078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0832 1 317 MYB Transcription Factor Family AT4G38620 57.009 5.66e-114 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy13g0832 Myb_DNA-binding 2.80E-14 CL0123