Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0803 ATGGATTGCATGAGAATCCAAAGCCCCTTGTCTGTTGAGAAGAATTGGAAATATGATGTGTTTGTGAGTTTTAGAGGGGAGACTCGCTTCAACTTCACTGATCATCTTTATGCTGCTCTCCAAAGACACGGCATATTTGCCTTCAGGGATGATACTAAGCTCGAGAAAGGAGGACTTATATCTGCAGGGCTTCTGAAAGCTATTGAAGGATCACAGGTTCTGATTGTTGTCTTCTCTATCAACTATGCTTCCTCCACATGGTGCTTGCAAGAGCTGGCAAAGATAGCTGACTGCATTGAAACACCGGGACAGCGTGTTCTGCCAGTTTTCTATGATGTGAGTCCAACTGAGGTGAGAAGGCAAAGTGGAAATTATGAAAAAGCCTTTATGAAACATGAAGAAAGATTCAAAGATGATGCAGAGAAGATGGAGCAAGTGCGAAGATGGAGGGCGGCTCTAACACAAGTAGCTAATCTCTCTGGCTGGGATGTGAAGAAGGATAAGTCACAATCTGCTGAGATTGAAAATATCGTCAAAGTGGTAACAAACATAGTGAGTCCCAAACCATCATCAAGTCTATCTGATGATATAGTTGGGATGCATTCTCCTCTACATGAATTAGAAAAGCTTCTACTTTTGCTCTCAGACGATGATGTTCGAGTTCGAGTTGTAGGGATTTGTGGAATGGGCGGCATAGGAAAGTCAACTCTTGCCACCATTTTATATGGAAAAATCTCTCATCAATATGATTCTTCATGTTTTGTGGATGACGTAAGTAGAATTTACGGAGATTATGGTCCACTTGGTGTACAAAAGCAACTTCTTTGTCAAGCTTTCATGCAAGAAAATTTTTCGATATGCAATCTTTCACTGGCAAATAATCTGATTCAAACTAGGTTATGCCATAGAAAGGTTCTCCTAGTTCTTGATAATGTTGATGAGGGGATTCAATTGGAGAAGTTGGCTATAAAACGGGAAAGGCTAGGTAGAGGGAGTAGATTAATCATAGTTTCTAGAGATGAGCATATATTGAGAGAGTATGGAGCGGATGAAGTTTTCAAAGTTCCGCTCTTAAATGATGAGAATGCTCTCCAATTGTTTTGCAGAAAAGCTTTCAAATGTAATCACGTTGCAAAAGATTACGAGAGCCTGACAGATTCTGCATTAAAATATGCTAATGGACTTCCTTTAGCGATTAAAGTATTGGGCTCATTTTTGTTTGGGCGAGATGTCTCCGAATGGAGTAGTGCATTAATTAGATTGAAAGAAAAGCCAACAAAAGATATTATGGATGTGCTACGAATCAGTTTTGATGCACTTGACGATATGGAAAAGGAAATATTTCTTGATATTGCTTGTTTCTTTCCATTTAAGCGCGAAGAATATGTGAAAGAGATTTTACGTATTCGAGGATTTTATCCTGATATTGGTATAAGAATTCTCATTGATAAATCACTTATAACTATTTTTGATGGATGGGAGATAGTTATGCACGATCTGTTGAGAGAGTTGGGTAGAAGTATTGTTCGAGAAAAATCACCCCACGAACCAAGAAAGTGGAGCAGGTTGTGGAATCAAAAGGATCTAAGCAATGTCTTACGAGAAAACAAGATAGCAGAAAACCTTGAAGCCATAGTTCTCCGAGAATTTTGTATCTACAGGGAAGAGTTGCCAGTTGAAGCTTTATCACAAATGAGTAACCTGAAATTGCTTATTATACTTAGTCTTACTGAAAATTTGAGTTTCTCAGGATGCCTGCATTTTCTTTCTAATGAGTTGGGATATCTTGAATGGGAAAGTTATCCTTTCACATGTTTGCCATCAAGCTTTCAGCCAAATAAACTCGTTAAACTAATCCTGGATTATAGCAACATCAAAGAACTCTGGAAGGGAATAAAGGTATGGCAGATATCCTTGTCTTTGTTAGTATTAATTTTATAA 1941 0.3833 MDCMRIQSPLSVEKNWKYDVFVSFRGETRFNFTDHLYAALQRHGIFAFRDDTKLEKGGLISAGLLKAIEGSQVLIVVFSINYASSTWCLQELAKIADCIETPGQRVLPVFYDVSPTEVRRQSGNYEKAFMKHEERFKDDAEKMEQVRRWRAALTQVANLSGWDVKKDKSQSAEIENIVKVVTNIVSPKPSSSLSDDIVGMHSPLHELEKLLLLLSDDDVRVRVVGICGMGGIGKSTLATILYGKISHQYDSSCFVDDVSRIYGDYGPLGVQKQLLCQAFMQENFSICNLSLANNLIQTRLCHRKVLLVLDNVDEGIQLEKLAIKRERLGRGSRLIIVSRDEHILREYGADEVFKVPLLNDENALQLFCRKAFKCNHVAKDYESLTDSALKYANGLPLAIKVLGSFLFGRDVSEWSSALIRLKEKPTKDIMDVLRISFDALDDMEKEIFLDIACFFPFKREEYVKEILRIRGFYPDIGIRILIDKSLITIFDGWEIVMHDLLRELGRSIVREKSPHEPRKWSRLWNQKDLSNVLRENKIAENLEAIVLREFCIYREELPVEALSQMSNLKLLIILSLTENLSFSGCLHFLSNELGYLEWESYPFTCLPSSFQPNKLVKLILDYSNIKELWKGIKVWQISLSLLVLIL* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0803 646 PRINTS Disease resistance protein signature 392 406 - -
Ahy13g0803 646 PRINTS Disease resistance protein signature 223 238 - -
Ahy13g0803 646 PRINTS Disease resistance protein signature 299 313 - -
Ahy13g0803 646 PRINTS Disease resistance protein signature 566 582 - -
Ahy13g0803 646 Pfam NB-ARC domain 207 427 IPR002182 GO:0043531
Ahy13g0803 646 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Ahy13g0803 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 451 IPR027417 -
Ahy13g0803 646 SMART till_3 17 159 IPR000157 GO:0007165
Ahy13g0803 646 Pfam TIR domain 17 191 IPR000157 GO:0007165
Ahy13g0803 646 Gene3D - 357 441 IPR042197 -
Ahy13g0803 646 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 162 IPR035897 -
Ahy13g0803 646 Gene3D - 186 353 IPR027417 -
Ahy13g0803 646 Gene3D - 11 185 IPR035897 -
Ahy13g0803 646 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 636 - -
Ahy13g0803 646 SUPERFAMILY "Winged helix" DNA-binding domain 428 533 IPR036390 -
Ahy13g0803 646 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 636 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0803 Ahy-Chr13 8492301 8494707 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0803 198 633 WRKY Transcription Factor Family AT5G45050 33.261 2.95e-67 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0803 - - aip:107628789 1235.32