Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0785 ATGGGTTTCCGTTTAACTGCTATTCGAAGAACATCCTCGTTCTCAGGTAGGCAAGCAGCTTCAAAATCTGTAGAAGTCCCAAAGGGGTATCTTGCAGTGTATGTCGGAGAAAACCAGAAGCGTTTTGTGATCCCCATTTCATATTTGAACCAACCTTCATTCCAAGACCTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGAGGTCTCACAATTCCGTGCAGTGAAGATGTCTTTCAACAAATCACATCCCGCTTGAATTGA 276 0.4384 MGFRLTAIRRTSSFSGRQAASKSVEVPKGYLAVYVGENQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQQITSRLN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0785 91 PANTHER AUXIN-INDUCED PROTEIN 6B 2 91 - -
Ahy13g0785 91 Pfam Auxin responsive protein 13 89 IPR003676 GO:0009733
Ahy13g0785 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0785 Ahy-Chr13 8263302 8264519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0785 18 84 Calmodulin-binding Proteins AT3G43120 50.746 9.39e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0785 K14488 - gmx:106794448 159.844