Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0781 ATGGGGTTTAGAAAATCAAACAAGATTTCACAAAGTGCGGTCTTGAAGCAAATATTGAAGAGGTGTTCGAGCTTAGGGAAGAAGAATAGTAACAACAATGGATATGAAAATAATAACAACGATCCTTTTCCTCTTGATGTTCCAAAAGGGCACTTTGCTGTTTATGTTGGTGAGAATAGAAGAAGGTACATTGTTCCGATTTCGTTGTTGGGTAATCCTGAATTTCAATGCCTTCTTCGTCAAGCCGAAGAAGAATTCGGGTTTGAACATGACATGGGTCTCACTATTCCCTGTGAAGAAGTTGTTTTTCTCCGCTCCTTAACTACTTCAAGTTGA 336 0.3869 MGFRKSNKISQSAVLKQILKRCSSLGKKNSNNNGYENNNNDPFPLDVPKGHFAVYVGENRRRYIVPISLLGNPEFQCLLRQAEEEFGFEHDMGLTIPCEEVVFLRSLTTSS* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0781 111 Pfam Auxin responsive protein 20 107 IPR003676 GO:0009733
Ahy13g0781 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 109 IPR003676 GO:0009733
Ahy13g0781 111 PANTHER SMALL AUXIN-UP RNA-RELATED 7 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0781 Ahy-Chr13 8248963 8249883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0781 5 103 Calmodulin-binding Proteins AT4G34750 45.455 3.29e-20 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0781 13 8248963 8249883 Ahy13g0781 13 8248963 8249883 ECH
Ahy13g0781 13 8248963 8249883 Ahy15g0881 15 12869441 12870135 ECH
Ahy13g0781 13 8248963 8249883 Ahy17g2288 17 110523479 110526472 ECH