Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0752 ATGAAGATCCAGTGTGATGTGTGTCACAAAGTGGAGGCCTCTTTCTTCTGTCCCTCTGATGAAGCAGCTCTATGCCATGGCTGTGATCGCACAATACACTGTGCCAACAAGGTTGCAACCAAACACACGCGCTTCTCTCTGCACCACCCTAACTCCAAAGACGCCCCTCTTTGTGATATCTGCCAAGAGAGACGTGCATATATATTTTGCCAAGAAGATAGAGCGATACTATGCAGTGAATGTGACGTTTCTATCCATGGAGCCAATGAATACACTAAGAAGCATAACAGGTTTCTTCTGACAGGTGTAAAGCTTGGTGCTGCTTCTTCTTCTTCTTCATCAGAGCCAACATCAATGTCCTCGAGTAGAGCCACAACAAGCTCTGAAGCAGCAAATAACCAGAATAATAATAATTATTATATGGGTAGTGACACGGGTTCAGTTTCAACAAGCAGCATTTCTGAGTATTTGATTGAGACCATACCCGGTTACTGCATGGAAGACCTTCTCGATGCTTCATTTCCGCCAAATGGTTTCTGTAAGGAGTATGAGCAGCAATCATTGTTTCAGGACCGAAATAATGTTCATCACTATGTCAGCATGTGTTCGTTTCCATTGGAAGCATGGTCTCCATCATCAACCCCAACTTAG 651 0.4393 MKIQCDVCHKVEASFFCPSDEAALCHGCDRTIHCANKVATKHTRFSLHHPNSKDAPLCDICQERRAYIFCQEDRAILCSECDVSIHGANEYTKKHNRFLLTGVKLGAASSSSSSEPTSMSSSRATTSSEAANNQNNNNYYMGSDTGSVSTSSISEYLIETIPGYCMEDLLDASFPPNGFCKEYEQQSLFQDRNNVHHYVSMCSFPLEAWSPSSTPT* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0752 216 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 187 - -
Ahy13g0752 216 Pfam B-box zinc finger 55 96 IPR000315 GO:0008270
Ahy13g0752 216 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 187 - -
Ahy13g0752 216 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Ahy13g0752 216 CDD Bbox1_BBX-like 57 100 - -
Ahy13g0752 216 Gene3D Classic Zinc Finger 1 97 - -
Ahy13g0752 216 MobiDBLite consensus disorder prediction 108 138 - -
Ahy13g0752 216 CDD Bbox1_BBX-like 5 47 - -
Ahy13g0752 216 SMART bboxneu5 53 100 IPR000315 GO:0008270
Ahy13g0752 216 SMART bboxneu5 4 47 IPR000315 GO:0008270
Ahy13g0752 216 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0752 Ahy-Chr13 7869488 7871428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0752 1 211 C2C2-CO-like Transcription Factor Family AT1G75540 43.922 3.22e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy13g0752 zf-B_box 4.90E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0752 - - gmx:100790232 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0752 13 7869488 7871428 Ahy13g0752 13 7869488 7871428 ECH
Ahy13g0752 13 7869488 7871428 Ahy15g0865 15 12581570 12583983 ECH