Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0726 ATGTTCTTCGTTATACTTGCGCCTCTTCTTCAAAGTACCCCCTTTTCCCTTCCTCTTCTCTCACCCGAGTTCATGGCTCCAAAGAAGGATAAGGCTCCTCCACCATCTTCTAAACCCGCCAAATCTGGTGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACCAGGTTCTGTTTGATCAGGGTACTTATGACAAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAGGGCTATAAGAGAGTTGATGGCTAGAGGTTCGATTAGACTGGTTTCCGCTCACGCGAGTCAGCAGATTTACACTAGAGCAACAAACACCTAG 399 0.4687 MFFVILAPLLQSTPFSLPLLSPEFMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNQVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMARGSIRLVSAHASQQIYTRATNT* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0726 132 Gene3D - 45 132 - -
Ahy13g0726 132 PANTHER 40S RIBOSOMAL PROTEIN S25 16 132 IPR004977 -
Ahy13g0726 132 Pfam S25 ribosomal protein 31 129 IPR004977 -
Ahy13g0726 132 MobiDBLite consensus disorder prediction 24 61 - -
Ahy13g0726 132 PANTHER BNAA04G12260D PROTEIN 16 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0726 Ahy-Chr13 7493744 7495549 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0726 25 131 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 6.49e-54 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0726 K02975 - gmx:100786842 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0726 13 7493744 7495549 Ahy13g0726 13 7493744 7495549 ECH