Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0702 ATGCTATTTTTGTGTCAAAAATGCAACCTTTACCTTCTTCCATTCTCCTCTGTACCATTCAAATCAAAGTCCATCTGCAACCAAACTTCAACTTCCACCATTCTCAACTGCCATAACCCACATTCCCAAGATGCCCCAGATGAACATCATCACAGCCCCGTTCACCGTAAACACAATTCCAAATCCACAAACTTTTTCCTTCAGAACCTTTCCCAGAACAACCAGAATCAGCAGCAACTCACTGCTTCCCAAAAGATTGAACTTGAAGAACACCCCATCATGCCCCACCAAGAAAAGGTGAAACTTTTGGAACTTTCCCTTGTTAGGAAGAGGACCCCTCAGTTCCCTGGTTCCATCTATGTTCAGTCCCCAAGTGACTCTGATGTGGGTTCTTCTCTTCCACCTATAAGAAACCTTTTTCAATCAAGTGTTGACAATGATGGTGATGGTGGTGGTGGTGGTGGTGATGGCCATGTTGATGAAGAAGAGGAGGAGATGATAATGCGTGCAGTTGAGATTCGTAGGAAGGTGACTTTGGAGATTTTCAAAGAAGCCATGATGAAGGAGGGCAGGTTTGGAATCACTTACACTACTAACTTGGCTAATAGGCTGCAAGGTTTCCTTGACTATGTTATGATTGAAGCTGCTAGCTTGAAGAGGATGCCAGAATATTATAACTCTAGTTTCAATTTGCGCTCCAAAGCCGTCATTGAGGACTCCCAGGTTGTGCCACTTATCAGATGGTTGAAGCATAATGAACTATCATATCCCCAGATATCAAAGCTCATTTTGTTGTCAAGAGGAAGAATTGATTTGATAAGGGACCGTGTCCAGTGGTTGAAGTCGAATCATGTGAAAGGGGAGTTCCTTGGGGTTGCACTTGTTAAGGGTGGTGAGAATATTTTGCACCGCAGCTATAAGGAACTTGACGAGATTGTAGAGTATCTGGTGTCCAATGGAGTTAGGAGAGACTGGGTGGGTTATGTCATTAGTCGATGTCCTCAATTGTTGTCGTACAGCTTAGAAGAAGTGAAGACTCGTGTGGCGTTCTATGTCGACATGGGTATGAATGAGAAGGATTTTGGCACAATGGTTTTTGATTTCCCCAGAGCACTTGGTTACTTAACTATGGAAGAAATGAACCAAAAGGTTAATTACTTGAAAGAATTTGGGCTTAAAAATGAGGATGTTGGCAAGTTGCTAGCATTTAGGCCACAATTGATGGGTTGTAGCATTGAAGAACAATGGAAACCTCTTGTTAAGTATTTCTACTATTATGGAATCACTAAAGATGGCATGAGGAGAATGCTTACCCTTAAACCAATGGTCTTTTGTACCGATTTGAAGTTGAATATTGTTCCAAAGGACATAGGGGTTAGAGATGATGCAGTTGGCAACATGCTTGTGAAGTTTCCTACTCTACTCACTTACAGCCTCAACAAGAAGATTAGGCCAGTGGTTATATTCTTGATGACCAAAGCTGGAGTAACTGAGAAAGATATTGCCAAGGTTGTAGCTCTGGGACCTGAGCTCTTGGGATGCAGCATTGTACAAAAGCTTGAAGTAAATGTTAAATATTTTTTGTCTCTTGGCATACACGTCCGGCAGCTAGGCGAGATGGTTGCTGATTTCCCATTGCTGCTCAGATACAATCCCGATGTCCTTCGGCCTAAGTATGTTTATCTGCGGCGAACCATGATCCGACCTTTGCAAGATATCATCGAGTTTCCAAGGTTTTTCAGCTATTCTCTTGAAGGGCGAATTATCCCAAGACACAAGGTTCTTGTGGAGAATCAGCTTAATATTAAGCTGAGATACATGCTGGCTAGCAGTGACGTACAATTCAATAAACTGGTCAATGATCTCATCAGAAAGCGCAAAAAATTTCAGTCTGGTGTTGCCGGCGATGAGGAGGAAGAGACTCAATCCAGCGAAGAGGAGGAAGAGACTCAATCCGAGGCTGTTATTCCAGTGGATACTACTACTAAACTCCAAACATAA 2001 0.4263 MLFLCQKCNLYLLPFSSVPFKSKSICNQTSTSTILNCHNPHSQDAPDEHHHSPVHRKHNSKSTNFFLQNLSQNNQNQQQLTASQKIELEEHPIMPHQEKVKLLELSLVRKRTPQFPGSIYVQSPSDSDVGSSLPPIRNLFQSSVDNDGDGGGGGGDGHVDEEEEEMIMRAVEIRRKVTLEIFKEAMMKEGRFGITYTTNLANRLQGFLDYVMIEAASLKRMPEYYNSSFNLRSKAVIEDSQVVPLIRWLKHNELSYPQISKLILLSRGRIDLIRDRVQWLKSNHVKGEFLGVALVKGGENILHRSYKELDEIVEYLVSNGVRRDWVGYVISRCPQLLSYSLEEVKTRVAFYVDMGMNEKDFGTMVFDFPRALGYLTMEEMNQKVNYLKEFGLKNEDVGKLLAFRPQLMGCSIEEQWKPLVKYFYYYGITKDGMRRMLTLKPMVFCTDLKLNIVPKDIGVRDDAVGNMLVKFPTLLTYSLNKKIRPVVIFLMTKAGVTEKDIAKVVALGPELLGCSIVQKLEVNVKYFLSLGIHVRQLGEMVADFPLLLRYNPDVLRPKYVYLRRTMIRPLQDIIEFPRFFSYSLEGRIIPRHKVLVENQLNIKLRYMLASSDVQFNKLVNDLIRKRKKFQSGVAGDEEEETQSSEEEEETQSEAVIPVDTTTKLQT* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0702 666 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 77 640 - -
Ahy13g0702 666 MobiDBLite consensus disorder prediction 38 59 - -
Ahy13g0702 666 Pfam mTERF 296 447 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 Pfam mTERF 455 615 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 PANTHER CGI-12 PROTEIN-RELATED 77 640 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 MobiDBLite consensus disorder prediction 140 160 - -
Ahy13g0702 666 Gene3D Transcription termination factor 3, mitochondrial 403 623 IPR038538 -
Ahy13g0702 666 MobiDBLite consensus disorder prediction 638 653 - -
Ahy13g0702 666 SMART mt_12 465 497 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 SMART mt_12 502 533 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 SMART mt_12 362 393 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 SMART mt_12 292 322 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 SMART mt_12 398 429 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 SMART mt_12 327 357 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 SMART mt_12 570 601 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 SMART mt_12 538 568 IPR003690 GO:0003690|GO:0006355
Ahy13g0702 666 MobiDBLite consensus disorder prediction 628 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0702 Ahy-Chr13 7293553 7297154 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy13g0702 mTERF 1.30E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0702 K15032 - zju:107426883 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0702 13 7293553 7297154 Ahy13g0702 13 7293553 7297154 ECH