Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0618 ATGGAAGATCAGTTTTTCTCTGAGGGAGAGGGAATTGGGTATTGGACACCTCCTGGCGCTCAATTCGATGGACCAAGCATGATAGACAACGGAATAAAAAATCTTGTATCAGAGGAGATGCTTGACAACCTCCCTGATCTCATGAACTTCGATAACCTTGCTGGTTGGGGTAATATTCCATCTGTGACTGATCATAATTTAGATAATGGAATTTCATCACTTGCCTCTATGCCGTATTCTCCACCTGATGCATTCAGTTTAGTGGAACAGGCTAATGATCCATACTTTATGACAAAAGATTGTGGAAATTATAATGCTATTGAAACCTCCTTGGGTTTCGATGAGAAGGCTGTGTTACAGCAATTGGAGACCCAACTTGGGTTGTCAGAAGATGCAAATGATATGAATAACATAAATGGATCACTTCAAGAATTGAGTGCTGCTGACATGGGAAATTGCTTGGTGCCTAGACCATTTGCTTGGTCGCTTGATGAGAAAATGCTGAGGGCTATGAGCTTGTTTAAGGAATCAGTTGGTGATGGAATATTGACACAAGTTTGGGCACCAATGAAGCATGGTAATGAGTTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCACATGCTAGCTGGATATCGAGACGTGTCGAGGGAATTTACCTTTTCTGCTGAAGACAAACCAGGGTCTTTTCCAGGGCTTCCCGGACGTGTGTTTATGTCCCAAATTCCTGAATGGACCTCCAATGTTGGGTACTACAATAAAAGTGAGTACCTGAGGGTGGAGCATGCAATTAATCACGAGGTTCGTGGATCAATTGCGGTTCCCATAATTGATACGCTCGCTGAACCACCTTGTTGTGCTGTACTAGAACTTGTCACTACAAAGGAAAAGCCTGATTTTGACAAAGAACTAGAAATTGTTAGCAGTGCACTCCAGCTTGTTAATTTAAGGACTACTACGCCTCCACGACTTATGTCCCAGTGTCTATCAAATAACAAAAGAGCAGCTTTAACAGAGATAATTGATGTGTCACGAGCTGTGTGTCGTGCGCATAGTTTGCCACTGGCATTGACATGGATCCCCTGTTATTATAGTGAGGGGATAGGAGATGAAGCTTCAAGAATACGGATTAAAGATGGGTGTAAAATTCCCGGTGAAAAAACTGTACTATGCATTGAAGAATCAGCTTGCTATATAAATGATATTGTGGTAGGAGGATTTGTTCGTGCATGTGTTGAACATTATCTCGAGGAAGGGCAAGGTGTAGCTGGGAAAGCGCTTCAATCAAATCGTCCATTCTTCTATTCCGATGTGAAGGCCTATAATATTAGTGAATATCCCCTTGTTCACCATGCGCGAAAATATAAGTTGAATGCTGCCGTTGCAGTCAGGCTAAGGAGTATTCATACCAATGATGATGATTACATAATAGAATTCTTTCTACCTGTCATTATGAATGGAAGTCAAGAACAGCAACTTTTATTAGACAATCTATCAGATACTATGCAGAGAATGTGTCAGAGTTTGAGGATAGTTTCGGATGATGAATTATACGGGATAGAAGGTTCGCAAGTGCAGTTTTCAAAGGAAGAAGGCTCGAGTTTTTTCTCTATGTCTAGGGGAAATTCTCATATGGCGCCGGAAGGTGACCATGATTCGGTCCAGCCTATGTCCTTGACAAACAATGAAACTGAAGCTGCTCATAACCAGGCAATGGATGGATCAAGAAAGCAGACTGAGAAAAAGAAAAGTACAGTGGAGAAGAATGTTAGCTTGAGTGTTCTCCAGCAATACTTCTCCGGTAGTCTTAAAGATGCGGCTAAAAGCCTTGGTGTTTGCCCAACAACCCTGAAAAGGATATGCAGGCAACACGGAATCGCAAGATGGCCATCGCGCAAGATCAATAAAGTTAATCGTTCGTTAAAAAAAATACAAACCGTGCTTGACTCAGTCCAGGGTGTGGAAGGAGGACTGAAGTTTGATCCTTACAAGGGGGGATTTATTCCAGGAGGATCAAGCAACCAAGAAATTAATGCACATAAAAGTTCTCTCTTCCGGAAGAAATGTTCTGGAAAATATCCTGATCCTGCATCAAAAGATGCAGTCACCGTATCTCCGGCATCTGGTAGCAAAGATTCAAAGCCAATAGGCATGGATGATGGTGGATTACGGCAGGAACCCTTTCCGGTTTCTATTTTGGAAAGTTCTAGGTGTGATATAGTATATCACAGTCCAAACACCCTGGTTGCCGATGAGATGGAAAATTATCTGAATGGGGCTGACAAGCTCGGCGAGCATCACAATCCCACTACTTCAAGCATGTCAGACTCGTCAAATGGCTCTGGCTCTCGGAAATTTGAGAATCGGAAACATTTGAAAGCCAAATCACCTTGTGTTGATAAGGGATCAAAAATTATTGTCAAAGCTGCCTACAAAGAAGATATGATCCGTTTCAAGTTTGATCCTGCAGCTGGTTGTCTCCAGCTCTATGAAGAAGTTGCAACAAGATTCAAATTACAAATCGGATCATTCCTGCTGAAGTATCTCGACGATGAAGAGGAATGGGTGAGGATGGTAAATGACTCAGATTTGGAAGAATGCATAGAAATATTGGATGATCTTGGCACCCGTGCTGTGAAATTTCTTGTTAGCGACATGCCTAGTGGTTTGAGCAGCAGTGGCAGTAACAGTTGA 2700 0.4222 MEDQFFSEGEGIGYWTPPGAQFDGPSMIDNGIKNLVSEEMLDNLPDLMNFDNLAGWGNIPSVTDHNLDNGISSLASMPYSPPDAFSLVEQANDPYFMTKDCGNYNAIETSLGFDEKAVLQQLETQLGLSEDANDMNNINGSLQELSAADMGNCLVPRPFAWSLDEKMLRAMSLFKESVGDGILTQVWAPMKHGNEFILSTSEQPYLLDHMLAGYRDVSREFTFSAEDKPGSFPGLPGRVFMSQIPEWTSNVGYYNKSEYLRVEHAINHEVRGSIAVPIIDTLAEPPCCAVLELVTTKEKPDFDKELEIVSSALQLVNLRTTTPPRLMSQCLSNNKRAALTEIIDVSRAVCRAHSLPLALTWIPCYYSEGIGDEASRIRIKDGCKIPGEKTVLCIEESACYINDIVVGGFVRACVEHYLEEGQGVAGKALQSNRPFFYSDVKAYNISEYPLVHHARKYKLNAAVAVRLRSIHTNDDDYIIEFFLPVIMNGSQEQQLLLDNLSDTMQRMCQSLRIVSDDELYGIEGSQVQFSKEEGSSFFSMSRGNSHMAPEGDHDSVQPMSLTNNETEAAHNQAMDGSRKQTEKKKSTVEKNVSLSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIARWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPYKGGFIPGGSSNQEINAHKSSLFRKKCSGKYPDPASKDAVTVSPASGSKDSKPIGMDDGGLRQEPFPVSILESSRCDIVYHSPNTLVADEMENYLNGADKLGEHHNPTTSSMSDSSNGSGSRKFENRKHLKAKSPCVDKGSKIIVKAAYKEDMIRFKFDPAAGCLQLYEEVATRFKLQIGSFLLKYLDDEEEWVRMVNDSDLEECIEILDDLGTRAVKFLVSDMPSGLSSSGSNS* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0618 899 MobiDBLite consensus disorder prediction 697 724 - -
Ahy13g0618 899 Gene3D - 802 886 - -
Ahy13g0618 899 SUPERFAMILY CAD & PB1 domains 802 890 - -
Ahy13g0618 899 Pfam PB1 domain 809 886 IPR000270 GO:0005515
Ahy13g0618 899 SMART PB1_new 806 888 IPR000270 GO:0005515
Ahy13g0618 899 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 714 899 - -
Ahy13g0618 899 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 714 - -
Ahy13g0618 899 MobiDBLite consensus disorder prediction 762 792 - -
Ahy13g0618 899 PANTHER PROTEIN NLP8 714 899 IPR045012 GO:0003700
Ahy13g0618 899 Pfam RWP-RK domain 591 639 IPR003035 -
Ahy13g0618 899 ProSiteProfiles RWP-RK domain profile. 571 659 IPR003035 -
Ahy13g0618 899 PANTHER PROTEIN NLP8 5 714 IPR045012 GO:0003700
Ahy13g0618 899 ProSiteProfiles PB1 domain profile. 806 888 IPR000270 GO:0005515
Ahy13g0618 899 MobiDBLite consensus disorder prediction 566 587 - -
Ahy13g0618 899 MobiDBLite consensus disorder prediction 767 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0618 Ahy-Chr13 6423605 6436789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0618 1 896 NLP Transcription Factor Family AT2G43500 47.619 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy13g0618 PB1 1.90E-14 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0618 - - ahf:112736799 1786.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0288 18 2371748 2377740 Ahy13g0618 13 6423605 6436789 PCT
Ahy8g1075 8 25739119 25745021 Ahy13g0618 13 6423605 6436789 PCT
Ahy13g0618 13 6423605 6436789 Ahy18g0288 18 2371748 2377740 PCT
Ahy13g0618 13 6423605 6436789 Ahy8g1075 8 25739119 25745021 PCT