Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0615 ATGACTAGCAGCTCTTTAAACTCAGATGATCCTTGTTTTGATGGTGATGGAAAATGGGCCACCAAGCTTCTTAGGGAGTGTGCTAGAGCAATCAATGATAGAGACTCAAGCAAAATCCAACACCTTCTATGGATGCTAAATGAGTTAGCTTCCCCTTATGGAGATTCTCAGCAGAAACTAGCCTCATATTTTCTTCAAGCTCTATTCTGCAAGGCCACTCAAACAGGCCAAAGATTCTACATGAATCTAAAATCAGCATCTGAAAAGAACCAATCTTTTGATTCAGCAAGAAAAATGATACTCAAATTTCAAGAGGTAAGTCCATGGACAACTTTTGGACATGTAGCTTCAAATGGTGCAATCTTGGAAGCCTTTTTAGAAGCAGGAGGAGAGAAAAACAAAAAGAAAAAGCTTCACATCATTGACATAAGCAACAACACTAGCACATTTTGCACTCAATGGCCTACTTTCTTGGAATCCTTGGCTACTAAGAGTAGTGATCATGTTGAAACTCCTCAATTGAAGCTGACAATTGTGTTGGTGAAAGAGAGCTTAAAAGGGTCAGTGATGAATGAAATTTGTCAGAGAATGGAGAAGTTTGCAAGGCTAATGAGAGTGCCCTTTGAGATTAACATGATAAATGGTGTGGAACATTTATGGAAGGTAACAAAAGAAGAGTTAGGAATAGTAGTTGAAGAAGAAGATAATGATGATGATGATGAGGTTTTTATTGCTGTGAACTGTGTTGGGGGATTGAGGAGAGTTGAGGAGGGAGAAAGGGGTAATGTAATTGGAATTTTGAAGTCTCTTAGTCCAAGAATTGTGACAATTGTTGAGGAAGAAAGTGGTGGTAGTGATGATTCTTGCATCACAAGAAATGATGATGATGACTTTGTAAAATGCTTTGAAGAGTGTTTAAGGTTTTACAAGATTTACTTTGAGATGTTAGAGGAGAGTTTTCCAACAATAAGCAATGAAAAGTTAATGCTAGAGAGGGAGTGTTCAAGAAACATACTTGTTGATTTGGGTTGCAATAATAATAATAATAATGATAGTGATCATAATAAAAGGGAGAGAGGAGTAGAGTGGTCTATGAGGTTTAGGGAGTATTTTACTCCAATAGGTTTGAGTGATGATGTTGTGGATGATGTTAGGGCATTGCTAAAGAGATATAATAGGTCAGGGTGGTCATTGATGTTGCCATCATCAAAAGTAGAAGGAATTTACTTGAAATGGAGGGATCAACCTGTTCTTTGGGCTTCAGCTTGGAAACCCTAG 1278 0.3779 MTSSSLNSDDPCFDGDGKWATKLLRECARAINDRDSSKIQHLLWMLNELASPYGDSQQKLASYFLQALFCKATQTGQRFYMNLKSASEKNQSFDSARKMILKFQEVSPWTTFGHVASNGAILEAFLEAGGEKNKKKKLHIIDISNNTSTFCTQWPTFLESLATKSSDHVETPQLKLTIVLVKESLKGSVMNEICQRMEKFARLMRVPFEINMINGVEHLWKVTKEELGIVVEEEDNDDDDEVFIAVNCVGGLRRVEEGERGNVIGILKSLSPRIVTIVEEESGGSDDSCITRNDDDDFVKCFEECLRFYKIYFEMLEESFPTISNEKLMLERECSRNILVDLGCNNNNNNDSDHNKRERGVEWSMRFREYFTPIGLSDDVVDDVRALLKRYNRSGWSLMLPSSKVEGIYLKWRDQPVLWASAWKP* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0615 425 ProSiteProfiles GRAS family profile. 11 424 IPR005202 -
Ahy13g0615 425 Pfam GRAS domain family 21 424 IPR005202 -
Ahy13g0615 425 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 424 IPR005202 -
Ahy13g0615 425 PANTHER PROTEIN SHORT-ROOT-LIKE 6 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0615 Ahy-Chr13 6406054 6407331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0615 5 425 GRAS Transcription Factor Family AT4G37650 47.936 4.65e-125 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy13g0615 GRAS 1.20E-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0615 - - adu:107477059 799.66