Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0603 ATGAAAATTCAGTGTGATGTGTGTGAGAAAGTTCCAGCAACAGTGATCTGTTGTGCAGATGAAGCAGCTCTGTGTGCAAAATGTGATGTGGAGGTTCATAGTGCTAACAAGCTTGCAAGCAAACACCAGAGGCTTCTCCTTCAATGTCTCTCTAACAAGCTTCCAAGATGTGATATTTGCCAAGATAAGCCAGCTTTCATATTCTGTGTCGAAGACAGAGCACTCTTCTGTAAGGATTGCGACGAACCAATTCATTTAGCTGGCAGCCTTTCTGCGAACCACCAGCGGTTTCTCGCTACTGGAATCCGGGTGGCTTTGGGTTCTAATGACTGCTCCAAAAGTGATGAGAAAAGCCACTTGGAACCATCTAATCCAGCTGCGCAACAAGTTCCAAGGAAAGTTCCTTCTCAGCAATCGCCTAGCTTCACTCCCCCTAGCTTTTGGGCAGTTGATCAACTATTGGATTTACCAGAGTTTGGATCACCAGAGAAAAAACAAGCAGACGAATTTGGAGAGTTGGAATGGCTAGCAGATGTTGGTATCTTTGGTGAACAGTTTCCTCAGGAAACATTAGCTGCAGCTGAAGTTCCTCAGCTTCCTGTGTCGCACACTAGCACTCTTGCACCATACACTTTTAAAGCCACTAATAAATCTTACATGTCTAGCAAAAAGCCTAGGATCGAAGTCTTAGGTGAAATAGACGATGAGCATTTCACTGTGCCTGATCTAGGCTAA 735 0.4463 MKIQCDVCEKVPATVICCADEAALCAKCDVEVHSANKLASKHQRLLLQCLSNKLPRCDICQDKPAFIFCVEDRALFCKDCDEPIHLAGSLSANHQRFLATGIRVALGSNDCSKSDEKSHLEPSNPAAQQVPRKVPSQQSPSFTPPSFWAVDQLLDLPEFGSPEKKQADEFGELEWLADVGIFGEQFPQETLAAAEVPQLPVSHTSTLAPYTFKATNKSYMSSKKPRIEVLGEIDDEHFTVPDLG* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0603 244 CDD Bbox1_BBX-like 57 98 - -
Ahy13g0603 244 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Ahy13g0603 244 MobiDBLite consensus disorder prediction 121 141 - -
Ahy13g0603 244 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 244 - -
Ahy13g0603 244 SMART bboxneu5 4 47 IPR000315 GO:0008270
Ahy13g0603 244 SMART bboxneu5 52 99 IPR000315 GO:0008270
Ahy13g0603 244 MobiDBLite consensus disorder prediction 113 141 - -
Ahy13g0603 244 CDD Bbox1_BBX-like 5 47 - -
Ahy13g0603 244 Pfam B-box zinc finger 52 94 IPR000315 GO:0008270
Ahy13g0603 244 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Ahy13g0603 244 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 244 - -
Ahy13g0603 244 Gene3D Classic Zinc Finger 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0603 Ahy-Chr13 6265860 6268633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0603 1 164 Orphan Transcription Factor Family AT1G06040 66.071 5.36e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Ahy13g0603 zf-B_box 2.10E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0603 - - gmx:100779183 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0303 18 2509555 2511187 Ahy13g0603 13 6265860 6268633 PCT
Ahy8g1099 8 26048844 26050453 Ahy13g0603 13 6265860 6268633 PCT
Ahy13g0603 13 6265860 6268633 Ahy18g0303 18 2509555 2511187 PCT
Ahy13g0603 13 6265860 6268633 Ahy8g1099 8 26048844 26050453 PCT