Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0590 ATGTATCCGAAACAGTCTGGCCAAGATGGCTCTGTTTCTGGTCCTGTGCGAACTAGTGATAGGATCAGGACAAGACCAAACATTTATGGCCGACCATTCATGTATTACAACACAAATCTTAGGCGGCGCAAGAAAAGCAAGAATAAGTCTAGGACAGCAGCTTCGATTGCCAAGATGCTGCGTCCAGGGAGCCGGAAGGCACAGGATTCAAATGCCAATTCTGGCTCTAGTAACCTTCGACGTTCAACTAGAAAGAGAAGGCTTAATGTAAATCTTGAAGGCTTTGCAACAGACAGCTCTGGAGCTGAGGATGAAGACTTAATGAGGCCTACATATCGACCACAATTGAGAAATCGGATCAACAATAGCATCAGCCAGGAAGAGTTGATGTCTAAGCACAAAAGAGCAGTGTCTACTAAATCAGCACCTAGACGTGAAGGTCTACGGCCTCGTCGTTCTAAGGCTGTGGCAAGAGAACAAGTAATTTCAGAATCAGATGATGGGCAAGACTTTTCAGAAGGCAAGGCAGAACAGGGTGAAACAGAAAATGGAAATGGTGAGGAAAATGATGCAGATGATGGTCAGAATGATATTGAAGGAGATGCTGAGGTGGAAGACGAAGGTGAGGATGATGAAGATGGTGATGATGAAGAGGGTGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAGGAAGAAGAGCAGGATGGAAGAAGGCGCTATGATCTTAGAAATCGTTCTGATGTCCGTAGGTTTTCTATGGAAGAGGGGAAGACCCAACCAAGATCTCCTCGTAGAGTGTTACATCAAGGTATGGGAAATAAGGTTAGCAGGGATGTTAGGAAGGGTGGATCACGAGTTCATAAACGGCATCGCCTTGCAAGGGCTGAAGACTCTGATGACTCCCTCCTTGTGGATGAGCTGGACCAAGGGCCTGCCATTCCGTGGGGTCGAGGTGGCAACAGATCTGGCCCCCCCTGGCTCTTTGGGGGCTTAGATACGCATGGAACAACAGCATGGGGCTTAAACCTTGCTGCATCGGGTTGGGCCCATCAGAGTGATGCTTTGGCTACCTTGACAACTGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGGGCAGATATCCAGCCCTTACAGGTTGATGATACTGTTAGTTTTGAGGATATAGGTGGGCTCTCTGAATACATTGATGCTCTTAAAGAAATGGTTTTCTTTCCATTATTGTATCCAGATTTCTTTGCTAGTTACCATATTACTCCTCCTAGAGGGGTGTTGCTATGTGGTCCCCCGGGAACTGGGAAAACATTAATTGCAAGAGCATTGGCTTGTGCTGCTTCAAAAGCCGGCCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCGGATGTGCTAAGCAAGTGGGTTGGTGAGGCTGAGAGACAATTGAAGCTACTCTTTGAAGAAGCACAAAGGAATCAACCTTCTATTATCTTCTTTGATGAAATAGATGGACTTGCACCTGTGAGGTCTAGCAAGCAAGAACAAATTCACAATTCCATTGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATTGGAGCTACCAATAGGATTGACGCTATTGATGGAGCTTTACGGCGCCCTGGTAGATTTGATCGTGAATTTAATTTTCCTTTGCCTGGTTGTGAGGCACGTGCCGAAATATTAGATATTCATACTCGCAAGTGGAAGCATCCACCTTCAAAGGATCTGAAAAGGGAACTTGCAGCTAGTTGTGTAGGTTACTGTGGTGCTGATCTAAAGGCTCTATGTACTGAAGCTGCCATTCGTGCTTTCCGTGAAAAATACCCACAGGTTTATACAAGTGATGACAAATTTCTTATAGATGTGGATTCGGTCAAGGTAGAAAAGTATCATTTTGTTGATGCAATGTCTACAATTACCCCTGCTGCTCACAGGGGAGCTATAGTGCACTCTAGGCCATTATCTCTTGTAGTTCAACCGTGTCTTCAGAGACATCTAGAAAGGGTCATGAGTATTATATCTGATATTTTCCCCCCAGTTTCTGTTGCATCAGAACTGACCAAATTTTCAATGCTTTCCTATGGATCTGCAATTCCACTTGTTTATCGACCTAGACTCCTACTTTGTGGTGGTGAAGGTACTGGGCTGGATCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCCGTACATTCATTAGGACTTCCATCTCTGCTATCAGATCCTAGTGCTAAGACACCAGAGGAGGCATTGGTACACATATTTGGCGAAGCTAGAAGAACCACACCATCAATTCTCTATTTACCACAATTTGATGTTTGGTGGGAAACTGCTCATGAACAACTCAGAGCTGTTCTCCTGACTTTGCTAGACGAATTGCCATCTGACATGCCTATCCTTCTACTGGGAACATCATCAGTTGTGCTTGCTGAAGTTGAAGATGTACCACATTCAGTTTTCCCTCATCGTTCAGTCTATGAAGTGAACATGCCATCTACTGAGGATAGGACCCTGTTTTTCAATCGATTAATTGAAGCTGCTATGTCAGTCTTGTTAGAAAGAATGAGTGAGAAATCCCATAATAAAGGACGCCTTCCTGAACTTCCCAAGGCACCAAAGTTGGCCACTGGTCCTAAGGTATCTGAGCTAAAAGCAAAGGTAGAAGCTGAGCAACATGCACTTCGCAGATTGCGAATGTGCCTAAGAGATGTTTGCAATCGGATATTGTATGACAAACGATTTAATGCCTTCCATTATCCAGTCTCTGATGAAGACGCACCTAATTATCGGTCAATCATACAGAACCCAATGGATATGGCTACTGTGCTGCATCATGTTGATAATGGTCATTATATCACATGTGCAGCATTCCTGCAGGATATTGATCTTATTGTTTCCAATGCAAAGGCTTACAATGGAGAGGACTACAATGGTGCTAGAATTGTCAGTAGAGCCTGCGAGCTGCGTGATGCGGTGCAAGGGATGATCTCACAGATGGATCCAGCACTGGTTGCATACTGTGACAAGATTGCTAGCCAAGGAGGTCCAGCCCAGTTGCCTGATGAATTAGGGGTATCCACTTTCCCTGCAACTCCTGTTGTTCAGCTGAGTGCTGCTACTAGAACAAGTGCTCGACTTCGTCATGTCCAACCGGAGGTTAATGTTGATCAGAGTTATGAAGCACTGAAGCGGACAAAGAAGACAGTTGATATTGCACATCCAGTGGCGGAGGAGAAGTCTCCAGAAGATCCTTTACCGTCTAAGCCTCCCCCGGAGCATCAGACAAATGACATGGATTCTGAAATGGTAGAACCTGTGACAATCGATGGAAATTCACATGGAACTTCTACGAGTAGCCAAGATGATGGTGGCAGAAGTCTTGAGGATGTCACAATGGTGGATGGTGAATTTTCAGGAAAAGTGGAGTCTTTAAAGGAACAATTTGTTAAGCGCAGTGAAAATTGCAGCGTTCCACAACTTGAAAGGCTTTACACAAGGATTATGAAGGGTGTGTTTGAAAGCAGAGATAAAGGTGATGATGTTAAGGCTTCGGTTTTGAAGTTTTTGTCGAAATTTGTAGAGGATGATGCAAATTTCTGA 3636 0.4458 MYPKQSGQDGSVSGPVRTSDRIRTRPNIYGRPFMYYNTNLRRRKKSKNKSRTAASIAKMLRPGSRKAQDSNANSGSSNLRRSTRKRRLNVNLEGFATDSSGAEDEDLMRPTYRPQLRNRINNSISQEELMSKHKRAVSTKSAPRREGLRPRRSKAVAREQVISESDDGQDFSEGKAEQGETENGNGEENDADDGQNDIEGDAEVEDEGEDDEDGDDEEGEEEEEEEEEEEEEEEEQDGRRRYDLRNRSDVRRFSMEEGKTQPRSPRRVLHQGMGNKVSRDVRKGGSRVHKRHRLARAEDSDDSLLVDELDQGPAIPWGRGGNRSGPPWLFGGLDTHGTTAWGLNLAASGWAHQSDALATLTTGIQTAGPSSKGGADIQPLQVDDTVSFEDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSKDLKRELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVKVEKYHFVDAMSTITPAAHRGAIVHSRPLSLVVQPCLQRHLERVMSIISDIFPPVSVASELTKFSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLLDELPSDMPILLLGTSSVVLAEVEDVPHSVFPHRSVYEVNMPSTEDRTLFFNRLIEAAMSVLLERMSEKSHNKGRLPELPKAPKLATGPKVSELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHYPVSDEDAPNYRSIIQNPMDMATVLHHVDNGHYITCAAFLQDIDLIVSNAKAYNGEDYNGARIVSRACELRDAVQGMISQMDPALVAYCDKIASQGGPAQLPDELGVSTFPATPVVQLSAATRTSARLRHVQPEVNVDQSYEALKRTKKTVDIAHPVAEEKSPEDPLPSKPPPEHQTNDMDSEMVEPVTIDGNSHGTSTSSQDDGGRSLEDVTMVDGEFSGKVESLKEQFVKRSENCSVPQLERLYTRIMKGVFESRDKGDDVKASVLKFLSKFVEDDANF* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0590 1211 Gene3D - 695 855 IPR027417 -
Ahy13g0590 1211 ProSitePatterns AAA-protein family signature. 531 549 IPR003960 GO:0005524|GO:0016887
Ahy13g0590 1211 PANTHER BNAC08G44480D PROTEIN 1 1206 - -
Ahy13g0590 1211 MobiDBLite consensus disorder prediction 42 244 - -
Ahy13g0590 1211 Pfam AAA+ lid domain 589 625 IPR041569 -
Ahy13g0590 1211 SUPERFAMILY Bromodomain 904 1018 IPR036427 GO:0005515
Ahy13g0590 1211 PANTHER AAA DOMAIN-CONTAINING 1 1206 IPR045199 -
Ahy13g0590 1211 Coils Coil 214 241 - -
Ahy13g0590 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 710 925 IPR027417 -
Ahy13g0590 1211 SMART bromo_6 906 1013 IPR001487 GO:0005515
Ahy13g0590 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 650 IPR027417 -
Ahy13g0590 1211 MobiDBLite consensus disorder prediction 1087 1139 - -
Ahy13g0590 1211 MobiDBLite consensus disorder prediction 277 296 - -
Ahy13g0590 1211 Pfam ATPase family associated with various cellular activities (AAA) 426 561 IPR003959 GO:0005524|GO:0016887
Ahy13g0590 1211 MobiDBLite consensus disorder prediction 1 30 - -
Ahy13g0590 1211 MobiDBLite consensus disorder prediction 1 20 - -
Ahy13g0590 1211 Gene3D - 384 654 IPR027417 -
Ahy13g0590 1211 Gene3D - 562 647 - -
Ahy13g0590 1211 Gene3D - 898 1026 IPR036427 GO:0005515
Ahy13g0590 1211 MobiDBLite consensus disorder prediction 1121 1137 - -
Ahy13g0590 1211 MobiDBLite consensus disorder prediction 128 182 - -
Ahy13g0590 1211 CDD AAA 422 561 - -
Ahy13g0590 1211 CDD AAA 706 844 - -
Ahy13g0590 1211 Pfam Bromodomain 919 987 IPR001487 GO:0005515
Ahy13g0590 1211 MobiDBLite consensus disorder prediction 183 236 - -
Ahy13g0590 1211 SMART AAA_5 422 563 IPR003593 -
Ahy13g0590 1211 CDD Bromo_AAA 906 1016 - -
Ahy13g0590 1211 PRINTS Bromodomain signature 954 972 IPR001487 GO:0005515
Ahy13g0590 1211 PRINTS Bromodomain signature 938 954 IPR001487 GO:0005515
Ahy13g0590 1211 PRINTS Bromodomain signature 972 991 IPR001487 GO:0005515
Ahy13g0590 1211 ProSiteProfiles Bromodomain profile. 929 991 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0590 Ahy-Chr13 6169459 6176840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0590 372 626 Calmodulin-binding Proteins AT3G56690 36.680 2.44e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0590 K22531 - gmx:100787765 1930.99