Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0576 ATGTCGTCAACCACCACCCCTCACGGTGGAGACTTCGACACGCCGACACTGGACATGGAGTCAGCGGAGCTCCTCCAAACCATATCGGAGCACGGCGGCTACGCCTACGTGAGAATGGCATCGCTGGCGGCGACCGGTGACGTCCGGGCCGCGGAGGCGGCGCTGGAGATGGCGTGGGAGCAGCTGCACTCAGGTCCGTGGCAGTCGGTGCTTCCGGTGTGGCGCGACGCGTACTCGATGGCATGCCTCCACGTGGCAAGGCACCACAACGGTAACGGCGAGTTCAAGGAGGCGCTTAGGGTTCTTGACATGGGGATCATCATGGGAGGGACGCTTCTCAGAAAGGATTTGGACTCTGCGATCGAGAAGGTTTCAGAGAGAGCCAAGAGTTCCCGTAGGGTTTCTGAGGGAAGCTTCCAAGAAGGTTCGGTCAACAACTCCGAGCAACGAAGCCTTGTTCATCCGCAATTTCATGTGTCTCAGGTGCTCCAACTTTTACCTATCAAGTCCCTTTCTTCTAAGATTGTGGAGAAGAGATCTGGTTTGTCGCTGGACAAGTTCTTGAAAGATCATTACCTGGCTGGTTCACCGGTTATCATCAGTGATTGTATGGTTCACTGGCCGGCCAAGACGAAATGGAACAACATAGACTATTTACTGAGAGTTGCTGGTGATCGTACAGTTCCCGTCGAGGTTGGCAAGAACTATTTATGTACAGACTGGAAGCAAGAGCTAATCACATTTTCAGAGTTGCTTCAGCGTATAAAATCCAATGGTGGTTCTCCAGGGGGTCCTACATATCTTGCCCAGCATCCATTATTTGATCAAATAAATGAGCTTCGGAAAGATATCTTTATTCCTGACTATTGTTTTGCCGGGGGAGGGGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCAGCTGGAACAGTAACGCCATTACACCATGATCCACATCATAACATACTAGCTCAGGTTGTTGGAAAGAAGTACGTTAGGCTTTACTCAGCATCTTTGTCTGAGGAACTTTATCCCTACTCGGAGACAATGCGTACCAATTCCAGCCAGGTTGACTTAGATGACATAGATGAAAGGAAGTTTCCTAAAGTGCAAGACTTGGAATTTGTAGACTGTATTTTAGAGGAAGGTGATATGTTATATATCCCACCAAAGTGGTGGCACTATGTGCGGTCCCTAACTACAAGTTTCTCAGTTAGCTTCTGGTGGAGTGAGGGTGAATGTTCAGATGCACCCTAA 1254 0.496 MSSTTTPHGGDFDTPTLDMESAELLQTISEHGGYAYVRMASLAATGDVRAAEAALEMAWEQLHSGPWQSVLPVWRDAYSMACLHVARHHNGNGEFKEALRVLDMGIIMGGTLLRKDLDSAIEKVSERAKSSRRVSEGSFQEGSVNNSEQRSLVHPQFHVSQVLQLLPIKSLSSKIVEKRSGLSLDKFLKDHYLAGSPVIISDCMVHWPAKTKWNNIDYLLRVAGDRTVPVEVGKNYLCTDWKQELITFSELLQRIKSNGGSPGGPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYSASLSEELYPYSETMRTNSSQVDLDDIDERKFPKVQDLEFVDCILEEGDMLYIPPKWWHYVRSLTTSFSVSFWWSEGECSDAP* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0576 417 SUPERFAMILY Clavaminate synthase-like 176 409 - -
Ahy13g0576 417 ProSiteProfiles JmjC domain profile. 275 417 IPR003347 -
Ahy13g0576 417 SMART cupin_9 266 416 IPR003347 -
Ahy13g0576 417 Gene3D Cupin 174 409 - -
Ahy13g0576 417 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 32 410 - -
Ahy13g0576 417 Pfam Cupin-like domain 186 409 IPR041667 -
Ahy13g0576 417 PANTHER - 32 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0576 Ahy-Chr13 6015107 6018945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0576 170 408 Acyl Lipid Metabolism Gene Families AT3G45880 24.916 2.27e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Ahy13g0576 Cupin_8 4.00E-48 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0576 K24444 - gmx:100813075 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0576 13 6015107 6018945 Ahy13g0576 13 6015107 6018945 ECH