Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0570 ATGGAGTCAGATCTTCACCGGCACCCTCCCATGTTCCTGGATCACCACCACCACCACCACCACCACCACCATCACCAGCAGATGAACACCACCACCACCAACAACAACAGCAATTCTTCGGGGCTAACGAGGTTCCGATCGGCACCAAGTTCGTATTTTTCTAGCATCATTGACAAGGAATTCTACGAAAGCATCTTCAACAAACCTTCAAGCCCAGAAACTGAGAAAATCCTCGCACGCTTCATGAATAGCCTTGCAAATGATGAACCTGAAGATGATTCATTACTTGGAGTAGCAGCTGCTACTACTACTACTAATAATAATAATAATAATAAAAATCTGTCACCGCCACAACAAGTAGTTCAGCAAATCTCGCAAGTGAAGGAAGAAGAGATTAGTATTAATACCATTAATACCAATAATACCCTTCAGCCTCAGCCTTTGCCTTCTTCAATGAATAATGAATCATTGGTGCAGCAACCACAGCAGCAGATGAATAGTATGAGTAACAATAATTATGGATCTTTGAGTGGTAATAATCCTCCAACTCAGAGTTTTTATCAAAGTTCAGGAAGACCACCTTTGCCGAATCAGATGAAAACTGGTCGTGGAAATGCTTCTAATCTTATTAGGCATGGTAGTTCACCTGCTGGATTCTTTTCAAACCTGAACATTGAAGGCTATGCTGCTTTAAGAGGCATGGGAACTATGGGAGCTGCTGCTAGCAACACTAGTGAGGATGCAAATTTTTCTCCGGTGGCGAGGTTGAAGAATCCACCAACCTTTTCATCCTCTGGACTAATGACTCCAATAGCTGAAATCAGGAGCACATCCAATACAATAAACAATCCAGAGAGTGCTGAAGCCTTTGCAGAAAGCCAGAGCAGCGATTTTATGTCAGGTTTAACCGTTGGTTCTTGGGACGATTCTTCTTCTTCGATGATGTCCGACAACATTGCTGGTCGGAAAAGGTTCAGAGACGAAGATGTGAAACCATTTGCCGGGGCGAATGTGGCCGACACTCAGGTTAAGACCGAAGCAGGCCAGGCTCCTGGTGCTCCATTGGCTCACCAGTTGAGTATGCCAAACACATCATCGGAAATAGCAGCCATTGAGAAGTTTCTCCAGTGCTCGGATTCTGTCGTGTGCAAGATTCGTGCCAAGCGGGGCTGTGCTACTCATCCAAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAAATTAGTGAGAGAATGAGGAAACTACAGGATCTCGTCCCTAACATGGACAAGCAAACAAACACAGCAGACATGTTGGACTTGGCTGTTGATTACATCAAAGAACTTCAAAACCAAGTTGAGACTCTTTCGGACAGTCAAGCCAAGTGTACGTGTGCACACAAGAAGCAGCAATAA 1392 0.444 MESDLHRHPPMFLDHHHHHHHHHHHQQMNTTTTNNNSNSSGLTRFRSAPSSYFSSIIDKEFYESIFNKPSSPETEKILARFMNSLANDEPEDDSLLGVAAATTTTNNNNNNKNLSPPQQVVQQISQVKEEEISINTINTNNTLQPQPLPSSMNNESLVQQPQQQMNSMSNNNYGSLSGNNPPTQSFYQSSGRPPLPNQMKTGRGNASNLIRHGSSPAGFFSNLNIEGYAALRGMGTMGAAASNTSEDANFSPVARLKNPPTFSSSGLMTPIAEIRSTSNTINNPESAEAFAESQSSDFMSGLTVGSWDDSSSSMMSDNIAGRKRFRDEDVKPFAGANVADTQVKTEAGQAPGAPLAHQLSMPNTSSEIAAIEKFLQCSDSVVCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQNQVETLSDSQAKCTCAHKKQQ* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0570 463 MobiDBLite consensus disorder prediction 12 27 - -
Ahy13g0570 463 MobiDBLite consensus disorder prediction 28 43 - -
Ahy13g0570 463 Gene3D - 392 463 IPR036638 GO:0046983
Ahy13g0570 463 SMART finulus 397 447 IPR011598 GO:0046983
Ahy13g0570 463 MobiDBLite consensus disorder prediction 136 194 - -
Ahy13g0570 463 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 37 460 - -
Ahy13g0570 463 MobiDBLite consensus disorder prediction 1 43 - -
Ahy13g0570 463 Pfam Helix-loop-helix DNA-binding domain 396 442 IPR011598 GO:0046983
Ahy13g0570 463 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 37 460 - -
Ahy13g0570 463 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 391 441 IPR011598 GO:0046983
Ahy13g0570 463 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 394 453 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0570 Ahy-Chr13 5952498 5956602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0570 12 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 36.726 8.27e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy13g0570 HLH 6.30E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0570 - - adu:107476789 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0570 13 5952498 5956602 Ahy13g0570 13 5952498 5956602 ECH
Ahy18g0329 18 2775199 2778433 Ahy13g0570 13 5952498 5956602 ECH
Ahy16g0369 16 7224047 7228598 Ahy13g0570 13 5952498 5956602 ECH
Ahy12g1618 12 87721576 87724841 Ahy13g0570 13 5952498 5956602 ECH