Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0555 ATGGAGGAAGTTGAACAAGCTAATAGATTAGCTGTTGAAAGCTGTCATAGAGTTCTTAGTATTTTGTCTCAGCCAAGGGATCAAGTTCAGAATAGGAATTTAATGGTGGAAACTGGTGAAGCTGTGTTAAGGTTCAAGAAAGTTGTTTCTTTGCTTCACAATGGTTTGGGTCATGCAAGAGTGAGGAAGCATAGAAAGCTTCAAGTACCCTTTTCTCAAAGCATACTCTTAGATAACCCGAATTGCTTCAAGAACAACAACAACAACCTTAACCATGGTCAATCAAAGAAAGTAGTGATGCTTCATGAGAATTCAGTTCAGGAATTGGGATCAAGTACGGTTAGGAACTCACTTTCTTTGGTGAATCCATCTTTGGAATTGAGCTCAAGTGCCAAAAGTACTATTAACCAACAAGGTTCTTCATCTAGTCACTATCAGTTCCTTCAACAGCAACAAATTCAGCAACAAAGGTTGTTGATGCAGCAGCAACAGCAGCAGCAACAAATGAAAAATCATGCTGAGATGATGTTCCGAAGGAACAACAGCGGCATAAACCTCAATTTCGACAGCACTAGCTGCACGCCGACAATGTCTTCTACTACTAGGTCTTTCATTTCTTCCTTGAGCATAGACGGAAGTGTGGCGAACCTGGACGGAAGTTCCTTCCATCTTATAGGAGCTCCACTCTCTTCTGATCAAAATTCGCAACAGCATAAGCGAAAATGTTCCGCTAGAGGCGACGAGGGCAGTGTGAAATGTGGAAGCAGTGCTAGATGTCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATTAAGGTGCCAGCTATCAGCAAAAAACTTGCAGACATACCTCCTGATGATTATTCATGGAGGAAGTATGGACAGAAACCAATCAAGGGTTCTCCTCACCCAAGGGGATATTACAAGTGCAGCAGCATGAGAGGGTGCCCTGCAAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCAACAATGCTAATTGTTACCTATGAAGGAGAGCATAACCATCCAAAGTTACCAACACAATCTGCAAATGCATGA 1065 0.4235 MEEVEQANRLAVESCHRVLSILSQPRDQVQNRNLMVETGEAVLRFKKVVSLLHNGLGHARVRKHRKLQVPFSQSILLDNPNCFKNNNNNLNHGQSKKVVMLHENSVQELGSSTVRNSLSLVNPSLELSSSAKSTINQQGSSSSHYQFLQQQQIQQQRLLMQQQQQQQQMKNHAEMMFRRNNSGINLNFDSTSCTPTMSSTTRSFISSLSIDGSVANLDGSSFHLIGAPLSSDQNSQQHKRKCSARGDEGSVKCGSSARCHCSKKRKHRVKRSIKVPAISKKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPTQSANA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0555 354 ProSiteProfiles WRKY domain profile. 281 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g0555 354 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 353 - -
Ahy13g0555 354 Pfam Plant zinc cluster domain 239 284 IPR018872 -
Ahy13g0555 354 MobiDBLite consensus disorder prediction 228 247 - -
Ahy13g0555 354 SMART WRKY_cls 286 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g0555 354 SUPERFAMILY WRKY DNA-binding domain 284 346 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g0555 354 Pfam WRKY DNA -binding domain 288 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g0555 354 Gene3D WRKY domain 272 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g0555 354 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 353 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0555 Ahy-Chr13 5754771 5757645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0555 1 351 WRKY Transcription Factor Family AT2G30590 57.180 3.17e-129 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g0555 WRKY 5.00E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0555 - - gmx:100170681 522.316