Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0549 ATGACAGACATGTATGAAAATCAAGCATCTCCTGATGTCTCAAATTATGCATCAAGTAGTGGAATCTCTTCTGGGGATGATAATAAAGGGATTGGTTATAGAGCTGCAAAATCAAAGCATTTATATCTTTTGGGTAGCAATTCTTGGTTTCAATCCTTTCCCTTCAAAATTGATCTCAATTTTGTTCGTATGGTGATGGCAGAGGTGATTGGAACATTTATTTTGATGTTCTGTGTAAGTGGAATAATAGCAAGCACAAAATTCCAAAGTGGCGAAGTGGGGCTTCTAGAGTATGCAGCCACAGCAGGATTAACAGTGGTTGTAATCATCTTCTCCATAGGACCAATTTCTTGTGCACATGTCAACCCAGCCGTCACAATTGCCTTTGCCACAATTGGTCATGTTCCATGGTACAAGGTTCCAATTTACATAATAGCACAGATAGCAGGTTCTATATTTGCCACATTCATAGGTAGCCTTGTTTATGGCATAAAATCAGAGGTTATGATCACAAGGCCAATCCAAGGTTGCAACTCTGCATTCTGGGTTGAACTCATTGCAACTTTCATCATCATGTTCCTTGTTGCAGCTTTGACATCTGAGTATGAATCAGTTGGGCAATTATCTGGCTTTGTTGCTGGAATTGCAATTGGTCTTGCTGTACTAATCACAGGGCCTGTGTCAGGTGGATCAATGAACCCTGCAAGATCATTAGGACCAGCAATTGTTTCATGGAAATTCAAGGACATTTGGATATACATGATAGCCCCAAGTGGTGGAGCCATAGCAGGAGCTCAAACCCTTCGTTTTCTTCGCCTTAATAAGGACCAACCTTGCAACACCGATGTTGGTCACCCCATACCCTATTGTTCAAGTTAG 879 0.4118 MTDMYENQASPDVSNYASSSGISSGDDNKGIGYRAAKSKHLYLLGSNSWFQSFPFKIDLNFVRMVMAEVIGTFILMFCVSGIIASTKFQSGEVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGHVPWYKVPIYIIAQIAGSIFATFIGSLVYGIKSEVMITRPIQGCNSAFWVELIATFIIMFLVAALTSEYESVGQLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWKFKDIWIYMIAPSGGAIAGAQTLRFLRLNKDQPCNTDVGHPIPYCSS* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0549 292 MobiDBLite consensus disorder prediction 1 24 - -
Ahy13g0549 292 PANTHER AQUAPORIN NIP2-1 10 280 IPR034294 -
Ahy13g0549 292 Pfam Major intrinsic protein 59 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy13g0549 292 PANTHER AQUAPORIN NIP7-1-RELATED 10 280 - -
Ahy13g0549 292 ProSitePatterns MIP family signature. 120 128 IPR022357 -
Ahy13g0549 292 Gene3D Glycerol uptake facilitator protein. 50 283 IPR023271 -
Ahy13g0549 292 PRINTS Major intrinsic protein family signature 63 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy13g0549 292 PRINTS Major intrinsic protein family signature 102 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy13g0549 292 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy13g0549 292 PRINTS Major intrinsic protein family signature 139 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy13g0549 292 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy13g0549 292 PRINTS Major intrinsic protein family signature 214 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy13g0549 292 SUPERFAMILY Aquaporin-like 58 275 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0549 Ahy-Chr13 5669606 5680366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0549 37 287 Major Intrinsic Protein MIP AT4G10380 40.467 2.07e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0549 K09874 - mtr:MTR_1g070385 435.647