Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0544 ATGGAGACTTTTGAGAAAGAAATGAATTATATGAAGAAGTATTATGGGAGTGGAGAGACAAAGAAAGTGTCATGGAGAGAATCACAACTCAAAGGGTTGCGTCGTTTCCTCATTGAAAAAGAAGAAGATATTTTGAAGGCCTTAATGCTCGACTTAGGAAAGCATCAAGTTGAAGCTTTTAGAGATGAGATAGGAACTTTGATGAAGTCCTTGAATTTTGCATTGAGTAACTTAAAATATTGGGTATCAGGCAAAAAGGCTAAATTGCCACAAATAGCACTGCTTAGTAGTGCAGAAATTGTTCCTGAACCTCTGGGCCTAGTCCTCATTATTTCATCTTGGAATTTCCCATTTGGTTTATCCTTGGAGCCACTAATAGGAGCAGTAGCAGCTGGAAACACAGTGGTCTTAAAGCCTTCAGAGTTATCACCAGCATGTTCTTCCATACTTGCCCTTGGACTTCCCAATTTCTTGGACAACAAAGCCATTAAGGTTGTACAAGGTGGACCCCATGAATCTCAGCACCTTCTCCAGCAAAAATGGGACAAAATCTTCTTCACAGGAAGTGCACGTGTGGGGAAGATTGTGATGTCAGCAGCAGCGAAGCATTTGACTCCTGTGACTTTGGAGTTGGGTGGAAAATGTCCTGCAGTTGTTGATTCACTTTCATCTTCTTGGGACTTGGAGGTAGCGGTGAAGCGAATTCTAGTGGGAAAATATGGGGCATGTGGTGGTCAAGCATGCATAGCAATTGACTATGTCCTCGTGGAAAATCAATACTATCCAAAACTGGTAGAATTGATGAAACTATGGATCAAGAAAATGTTTGGGGAGAACCCAAAAGACTCCAACACCATTGCAAGGATAGTTAATAAACAACACTTGTCTAGATTGAAGAATCTTTTGGCTGATCCAGAGATCAAGAAATCTGTGGTTTATGGAGGCTCTATGGACGAAAGAAACTTATTTATTGAGCCAACAATCTTGTTGAATCCCCCACTTGAATCAGTAATCATGACAGAAGAAATTTTTGGTCCATTGCTTCCAATTATTACTGTAAGATTCGGTGAAAATCATGCTATATATAGAATTGACGTTTTTCTTAATGTTGCCTTCAATAATTTTCAGGTGGACAAAATTGAAAACAGTATTAAATTCATAAGCTCTAGGCCTAAGCCTCTTGCACTCTATGTCTTTTCCAAAGATAAGACACTGCAGAATAGAATGATATCTGAAACATCTTCTGGCAGTTTAACTTTCAATGATGCAATTCTACAATATGCAGCGGATTCTCTACCATTTGGTGGAGTTGGAGAAAGTGGATTTGGAATGTACCATGGGAAGTTCTCTTTTGATACATTCAGCAGCCAAAAGGCAGTAGTTAGAAGAAGCTTCCTCACTGATTTCTGGTATAGGTATCCACCATGGACACTGAACAAGTTTCAGCTTCTTGAGGTCTCTTACAACTATGATTATCTGGGGTTGCTCCTTGTCTTGCTTGGCCTAAAGACACCATCAAAACGCAGATCATATTTCGCTAACCCCTGA 1548 0.3986 METFEKEMNYMKKYYGSGETKKVSWRESQLKGLRRFLIEKEEDILKALMLDLGKHQVEAFRDEIGTLMKSLNFALSNLKYWVSGKKAKLPQIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSELSPACSSILALGLPNFLDNKAIKVVQGGPHESQHLLQQKWDKIFFTGSARVGKIVMSAAAKHLTPVTLELGGKCPAVVDSLSSSWDLEVAVKRILVGKYGACGGQACIAIDYVLVENQYYPKLVELMKLWIKKMFGENPKDSNTIARIVNKQHLSRLKNLLADPEIKKSVVYGGSMDERNLFIEPTILLNPPLESVIMTEEIFGPLLPIITVRFGENHAIYRIDVFLNVAFNNFQVDKIENSIKFISSRPKPLALYVFSKDKTLQNRMISETSSGSLTFNDAILQYAADSLPFGGVGESGFGMYHGKFSFDTFSSQKAVVRRSFLTDFWYRYPPWTLNKFQLLEVSYNYDYLGLLLVLLGLKTPSKRRSYFANP* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0544 515 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 13 458 IPR016162 GO:0016491
Ahy13g0544 515 Pfam Aldehyde dehydrogenase family 375 460 IPR015590 GO:0016491
Ahy13g0544 515 Pfam Aldehyde dehydrogenase family 21 361 IPR015590 GO:0016491
Ahy13g0544 515 PANTHER ALDEHYDE DEHYDROGENASE 4 357 IPR012394 GO:0006081
Ahy13g0544 515 SUPERFAMILY ALDH-like 12 477 IPR016161 GO:0016491
Ahy13g0544 515 PANTHER ALDEHYDE DEHYDROGENASE 4 357 - -
Ahy13g0544 515 PANTHER ALDEHYDE DEHYDROGENASE 373 511 - -
Ahy13g0544 515 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 440 IPR016163 GO:0016620
Ahy13g0544 515 PANTHER ALDEHYDE DEHYDROGENASE 373 511 IPR012394 GO:0006081
Ahy13g0544 515 PIRSF ALDH 372 496 IPR012394 GO:0006081
Ahy13g0544 515 PIRSF ALDH 1 365 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0544 Ahy-Chr13 5634789 5637696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0544 2 503 Aldehyde Dehydrogenase Gene Family AT4G36250 50.598 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0544 K00128 - gmx:100817701 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0544 13 5634789 5637696 Ahy13g0544 13 5634789 5637696 ECH
Ahy18g0348 18 2993601 2998749 Ahy13g0544 13 5634789 5637696 PCT
Ahy8g1152 8 26738054 26743938 Ahy13g0544 13 5634789 5637696 PCT
Ahy13g0544 13 5634789 5637696 Ahy18g0348 18 2993601 2998749 PCT
Ahy13g0544 13 5634789 5637696 Ahy8g1152 8 26738054 26743938 PCT