Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0539 ATGGGAGCTCGTTGCTCTAAATTCTCTCTCTGTTGGTGGCCTTCACACATCAAATCAAACCTTCACGACTTATCTGATAATGATGACGGGGGCAAGAATGAGAAGGATCAATGGGTTGGATTCAATGAGTACACGTGGGATCAGCTTAAGGTTGCAACTTCAGGTTTCTCACCAGAGAACATTGTCTCAGAACATGGAGAGAAAGCTCCCAATGTTGTTTACAAAGGAAGGCTTGAAGATGATAGGTTGGTTGCTGTGAAGCGCTTCAACAAATCAGCTTGGCCTGATTCGAGACAATTTCTAGAGGAAGCAAGAGCAGTGGGGCAGTTAAGGAATGAAAGATTAGCTAACTTGGTTGGATGCTGCTGTGAAGGAGAAGAGAGGTTGCTTGTTGCAGAGTTCATGCCACATGAAACTCTCTCCAAACATCTCTTCCACTGGGAGACACAGCCCATGAAATGGGCAATGAGGTTGAGGGTGGCATTGTATTTGGCACAAGCATTGGATTACTGCAGCAGTCGAGGAAGAGCATTGTATCATGATCTTAATGCTTATAGAATCTTGTTTGATGAGGATGCCAACCCCAGGCTCTCTTGTTTTGGACTCATGAAAAACAGTAGAGACGGCCGAAGCTATAGCACAAATTTAGCCTTCACTCCTCCGGAGTACTTGAGGACCGGAAGAATCACCCCTGAAAGTGTAGTATACAGTTTTGGCACACTTTTGCTTGATCTTCTGAGTGGAAAGCATATTCCACCCAGTCATGCACTTGACCTTATACGCGGCAAAAATTTTTCCTTGCTGATGGACTCTTGTTTAGAAGGTCATTTTTCGAACGATGATGGAACTGAGATAGTGAGATTGGCTTCGCGTTGTCTACAATATGAACCTCGTGAGAGACCAAATGCAAAGTCACTTGTGACCGCTCTAACTCCTCTTCAGAAAGAAACTTCAGTACTGTCGTATGTTTTGATGGGCATACCAGATGGGAATGTATCATCAAAGGAAACAGTTTCTTTGACACCTTTTGGTGAAGCTTGTTCAAGAAGAGATCTCACTGCTATACATGAAATTTTGGATAAGGTGGGGTACAAGGATGATGAAGATGTTGCAAACGAGCTTTCCTTCCAAATGTGGACAAATCAAATACAGGAAACACTGAATTCTAAGAACCTTGGAGATACTGCTTTTCGTGCTAGAGACTTCTCCACAGCCATTGACTACTACACACAATTCATTGATGTTGGGACCATGGTATCGCCAACCGTGTATGCCAGGCGTTGCTTATGCTATCTTATGAATGACATGCCACAAGAGGCACTCGGAGATGCTATGCAAGCTCAATCAGTATCTCCCACATGGCCAACGGCATTCTATCTTCAAGCTGCTGCACTCTTCAGCCTTGGCATGGACAACGATGCACAGGAAAGTCTTAAAGACGGCACAATACTGGAAACCAGGAAGCATAGAAATTGA 1476 0.4411 MGARCSKFSLCWWPSHIKSNLHDLSDNDDGGKNEKDQWVGFNEYTWDQLKVATSGFSPENIVSEHGEKAPNVVYKGRLEDDRLVAVKRFNKSAWPDSRQFLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPHETLSKHLFHWETQPMKWAMRLRVALYLAQALDYCSSRGRALYHDLNAYRILFDEDANPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFSLLMDSCLEGHFSNDDGTEIVRLASRCLQYEPRERPNAKSLVTALTPLQKETSVLSYVLMGIPDGNVSSKETVSLTPFGEACSRRDLTAIHEILDKVGYKDDEDVANELSFQMWTNQIQETLNSKNLGDTAFRARDFSTAIDYYTQFIDVGTMVSPTVYARRCLCYLMNDMPQEALGDAMQAQSVSPTWPTAFYLQAAALFSLGMDNDAQESLKDGTILETRKHRN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0539 491 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0539 491 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 491 - -
Ahy13g0539 491 SUPERFAMILY Protein kinase-like (PK-like) 37 317 IPR011009 -
Ahy13g0539 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Ahy13g0539 491 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Ahy13g0539 491 Gene3D Tetratricopeptide repeat domain 380 489 IPR011990 GO:0005515
Ahy13g0539 491 SUPERFAMILY TPR-like 389 479 IPR011990 GO:0005515
Ahy13g0539 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Ahy13g0539 491 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0539 Ahy-Chr13 5597519 5601239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0539 27 333 Glycoside Hydrolase AT3G07070 32.153 1.01e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Ahy13g0539 PK_Tyr_Ser-Thr 2.40E-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0539 - - gmx:732542 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0539 13 5597519 5601239 Ahy13g0539 13 5597519 5601239 ECH