Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0504 ATGGCATTCACACTAGAAGAGAGGAGGAGTAGTAACATTGAAGAGGAGGAGAACATGAATAAGATGAAGGTGATGATAATGATGATGGATTCATCATCATCACAAAAGAAGTTACCATCATCATCATCAGTGCCTGCACCATTCCTGACAAAGACATACCAACTAGTTGATGATCCTATGACTGACCACATAGTGTCATGGGGTCATGATGGTCATTCCACATCATCATCATCATCATTTGTTGTTTGGAGACCTCCTGAGTTTGCCAGAGACCTTCTTCCCAACTATTTCAAACACAACAACTTCTCCAGCTTTGTTAGGCAACTCAATACCTATGGATTCAAGAAGGTAGTTGCTGATAGATGGGAATTTGCAAATGAGTATTTCAGAAAAGGAGCAAAACATCTTCTATGTGAAATCCATAGAAGAAAAACCCCTCATCACCATCATCATCATCATCAAGAGAATAATAATGAAGCTCTATGTTGGATTGATTCTTCTACAACTCCTACTACTATTCCTTCTATTCCTACTTCATTATTACTACCTTCTCCTAAATCACCATCATGTTCTTCATTAGGAGGAGGCACTAATAGTGATCATCATCACCATCAACATAATCATATCTTAGCAGCACTTTCTGAGGATAATCAAAGGCTAAGGAGAAAGAACTTGATGCTCTTATCTGAACTAACTCACATGAAGAATCTCTACAATGATATCATCTACTTCATCCAAAACCATCTCAAACCTGCTTCTTCTCCCTCTCATCATAATCAAACATTAACTATTCCAAAGCTGGTGGAGTTGGATTCATCACCAAAGGGTAGTAGAATGATGATGAGTATTAGTGATGATGATGATGATGATGATGATTACAACAATAATAATTGTAGTTCTTCTTCAGTGAAGCTCTTTGGTGTTCCTCTTAGTGGTAAAAAGAGATTACACCCAGATAATATTTTTCAACAAGATTAA 978 0.3712 MAFTLEERRSSNIEEEENMNKMKVMIMMMDSSSSQKKLPSSSSVPAPFLTKTYQLVDDPMTDHIVSWGHDGHSTSSSSSFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKVVADRWEFANEYFRKGAKHLLCEIHRRKTPHHHHHHHQENNNEALCWIDSSTTPTTIPSIPTSLLLPSPKSPSCSSLGGGTNSDHHHHQHNHILAALSEDNQRLRRKNLMLLSELTHMKNLYNDIIYFIQNHLKPASSPSHHNQTLTIPKLVELDSSPKGSRMMMSISDDDDDDDDYNNNNCSSSSVKLFGVPLSGKKRLHPDNIFQQD* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0504 325 MobiDBLite consensus disorder prediction 183 198 - -
Ahy13g0504 325 Coils Coil 210 230 - -
Ahy13g0504 325 Pfam HSF-type DNA-binding 48 143 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy13g0504 325 ProSitePatterns HSF-type DNA-binding domain signature. 93 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy13g0504 325 Gene3D - 41 145 IPR036388 -
Ahy13g0504 325 MobiDBLite consensus disorder prediction 183 205 - -
Ahy13g0504 325 SMART hsfneu3 44 143 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy13g0504 325 SUPERFAMILY "Winged helix" DNA-binding domain 45 143 IPR036390 -
Ahy13g0504 325 MobiDBLite consensus disorder prediction 273 296 - -
Ahy13g0504 325 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 316 IPR027725 -
Ahy13g0504 325 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-4D 16 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0504 Ahy-Chr13 5208613 5210338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0504 43 317 HSF AT1G46264 47.040 1.04e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy13g0504 HSF_DNA-bind 2.50E-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0504 K09419 - gmx:100527682 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0504 13 5208613 5210338 Ahy13g0504 13 5208613 5210338 ECH