Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0484 ATGGGTGAGGAAGTTAGGATGACCGACTACCAAGACGACGACCGAGTCGCCGACTGGGAATTGGGCCTTCCGGCGGTCCATGATCTCACCCCGCTCTCTCAGCTCTTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCTCGCCGGAGCCACACCGTTCCCTTGTCGACGTCAACCGCGCCTCAAAGAACACTCTCTCCACCCTCCGTACCGGCGTCAACGCCTTCTCCTCCTCCAACCTCAACCCCTTCCAAGACGAGGGAAACGATCCCGCCGGAGACGACGAGGAAGAGATCGTTCCGGACGGTTCGGGCTCCAATTCGAGGAAGCTCCGGAAGGTCGATTGTGCGGAGGAAGCGGATTCTGTGCCGCGCACCGACAGTGCCGCCGCCGTGAAGCGACCGAGGCTTGTGTGGACACCGCAGCTGCACAAGCGATTCGTGGACGTGGTGGCGCACCTAGGGATCAAGAACGCGGTGCCGAAGACGATCATGCAGCTTATGAACGTGGAAGGGTTGACCCGAGAGAACGTCGCCAGCCACCTCCAGAAGTATCGCCTCTATCTTAAGCGGATGCAAGGGCTCTCCGCCGACGGACCTTCTTCCTCCGACCACCTCTTCGCCTCCACGCCGGTTCCTCAAAGCCTCAACGACAGCGGCGGAGGAGGAGGAAGTGGCCACTCCCGTGGGAACGGGCACCTTCCGGTTCCGGTCCCGATGCATTATCCTCCGGCGGCGATGATGCCAATGCCGATGCTCGGCATGCCACATGGCTTTCATCATCACCATGTGTTGCAGCAGAGGGATTGGTCCTACCCACCACATGTCACTCCTAATGATAAATGA 846 0.6064 MGEEVRMTDYQDDDRVADWELGLPAVHDLTPLSQLLIPPELASAFSISPEPHRSLVDVNRASKNTLSTLRTGVNAFSSSNLNPFQDEGNDPAGDDEEEIVPDGSGSNSRKLRKVDCAEEADSVPRTDSAAAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSADGPSSSDHLFASTPVPQSLNDSGGGGGSGHSRGNGHLPVPVPMHYPPAAMMPMPMLGMPHGFHHHHVLQQRDWSYPPHVTPNDK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0484 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 190 IPR017930 -
Ahy13g0484 281 MobiDBLite consensus disorder prediction 199 237 - -
Ahy13g0484 281 MobiDBLite consensus disorder prediction 108 122 - -
Ahy13g0484 281 MobiDBLite consensus disorder prediction 77 130 - -
Ahy13g0484 281 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 270 - -
Ahy13g0484 281 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 270 IPR044841 GO:0003700|GO:0006355
Ahy13g0484 281 Pfam Myb-like DNA-binding domain 138 186 IPR001005 -
Ahy13g0484 281 Gene3D - 131 193 - -
Ahy13g0484 281 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 135 187 IPR006447 GO:0003677
Ahy13g0484 281 MobiDBLite consensus disorder prediction 199 224 - -
Ahy13g0484 281 SUPERFAMILY Homeodomain-like 132 191 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0484 Ahy-Chr13 4970459 4974315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0484 1 263 G2-like Transcription Factor Family AT3G46640 53.819 1.85e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy13g0484 Myb_DNA-binding 1.00E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0484 - - zju:107411020 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0484 13 4970459 4974315 Ahy13g0484 13 4970459 4974315 ECH