Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0469 ATGGATCCAAATTATCCAATAGGCGGCAGTGATGATTTCATGAACAGCTTCCAAATTGGTGAAGATGGCACCATAGTATTCTCTGATGATCAAAATCAGTTTTATTATGATGCCAACCAGCACCTTGATCCTCTTTACCAGCATGTTGCAGACCAACTTTTTGATGAATTTCCTCAGTACACAAGCCATGTGGAAGAAGCTGCAGCTGCTCCTGTTGCCTCCACCGTGGTGGATCCTTCCGTTGAGGACGCTGATTTCTCAGAAACAGCAAAGTTTATAACACAAGTTCTCATGGAAGAGGGTGTTGAACAAAGGCCATTCTATGACCCTTTCAGCTTGAATGCCACTGAGCAATCCTTCTATGATGCTCTTAACGATGTTCTCATAGACAACATCAACATGCCACTCTCCCCCAATGAACACCCTCTTGATGTTCATCATCAAGGTGGAACAACCAGCAGCAGCAGCAGCGGCAGCAACAGTGGCAACAACAACGACAATCAAAACAATAACAACCCTGTTGATGAGAACTCTAGCGAGTTTCTGAAGCCTTCTGTTTCTCCTGATACCTTTAGCTCTGGTGATCATGCTTTTCAGTTTAACTCCCATGCCATTTCTCAACATGACTCGAATGTTTCCTATGCTAATTTTGGGGTGTATGATGTGGATACTTCTTTTACCAAGCTGTTGGCTCAAAATATTTTCAGCGACTCAGATTCTGTCTCCCAGTTCAGGAGAGGCTTAGAGGAAGCTAGCAAGTTTCTTCCTCCGGGACCTCAGCTTGTGACTGGTTTTGAGACCACACCGGCTGTCGTGGTGCCTATAGACGAACCAAAGGGAGATAAAGCCGTTGGGTTGAAGGGCAGAAAGAATCATGAACGTGAAGAATGGAGTGATGATACAGAAGAAGGGAGGAGTAACAAGCATTCGGCAACTAGCAGTGTAGTTGATGAGAGTGAATTATCTGAAATGTTTGATAAAGTATTGCTTAGTATTGGTGCGCCAATGTGCTTTCCAGTGAACAATGAAGTAGAGAAAGCTTCTAATCCCTCAACCTCTAATGGAGGGAAGGGTCGTCCTAAGAGACAAGGGAAGAAGAAAGAAACCATTGATTTGAGGACCCTTTTGGTTCTGTGTGCACAAGCTGTGTCTGCTTGTGACAACAGGACTGCCACTGAGCTTCTCAAGCAAATTAGGCAGCATTCGACTCCCTCTGGGGATGCAACGCAAAGAACGGCTCATTACTTCGCCAATGGCCTTGAAGCACGCTTGCATGGTGATGGCACTGGAACACAAGGATTCTACACCTATGTCAGCACCAAGAGGCTAAGTGCTGCTGAGTTTTTGAAAGCTTACAAGGTGTTCATGAATGCCTGCCCTTTTTCGAAGTTTGCAAATTTCTTTGCAAACAAAATGATAATGAAAGCAGCTCAAAATGCAGAAACACTTCACATCATTGATTTTGGTATCTTATATGGTTTCCAGTGGCCAATTCTGATTAAGTTCCTCTCAGACAGAGAAACTGGACCCCTCAAGAAGCTGAAGATCACAGGAATAGAGTTTCCCCAACCTGGTTTCCGTCCTGCAGAAAGACTTAACGAGACTGGTCGTCGTCTTGCTAACTACTGCGAGCGTTTCAAGGTTCCCTTCGAGTATAATGCCATAGCATCAAGGAACTGGGAAACCATCCAGGTTGAAGACCTTAAAATTGAGAGCAATGAGTTTCTTGCTGTGAACTGTCATAAGAGGTTTGAGAATTTGATGGATGAAACAATTGAAGTGAACAGTCCTAGAGATGCAGTGTTGCAGTTGATCAGGAAGATAAATCCGGATATTTTTGTTCAGGCCATTGTTAATGGATCTTATAATGCACCTTTCTTTGCCACACGATTCAGGGAGGCACTGTTCCATTTTTCTGCAATTTATGACATGTGTGACGCTGTCATCCCCCGTGACAATGAGAAGAGAATGAAGATTGAGAGAGAGATTATAGGCCGGGAGGTTTTGAATGTTGTGGCGTGCGAAGGTTTTGAAAGGATTGATAGGCCTGAGACATACAAGCAATGGCAGGCTAGGAATACAAGGGCTGGTTTCAAGCAGCTACCCTTGAATGAGGAACTAATGGCCAAATTTTCAGCCAAGTTAAAGGAATGGTACCACAAAGACTTTGTCTTAGATGAGGATGGCAACTGGATGCTTCAAGGTTGGAAGGGCCGCGTCTTATACGCTTCCACTTGTTGGGTGCCTGCATAG 2253 0.4434 MDPNYPIGGSDDFMNSFQIGEDGTIVFSDDQNQFYYDANQHLDPLYQHVADQLFDEFPQYTSHVEEAAAAPVASTVVDPSVEDADFSETAKFITQVLMEEGVEQRPFYDPFSLNATEQSFYDALNDVLIDNINMPLSPNEHPLDVHHQGGTTSSSSSGSNSGNNNDNQNNNNPVDENSSEFLKPSVSPDTFSSGDHAFQFNSHAISQHDSNVSYANFGVYDVDTSFTKLLAQNIFSDSDSVSQFRRGLEEASKFLPPGPQLVTGFETTPAVVVPIDEPKGDKAVGLKGRKNHEREEWSDDTEEGRSNKHSATSSVVDESELSEMFDKVLLSIGAPMCFPVNNEVEKASNPSTSNGGKGRPKRQGKKKETIDLRTLLVLCAQAVSACDNRTATELLKQIRQHSTPSGDATQRTAHYFANGLEARLHGDGTGTQGFYTYVSTKRLSAAEFLKAYKVFMNACPFSKFANFFANKMIMKAAQNAETLHIIDFGILYGFQWPILIKFLSDRETGPLKKLKITGIEFPQPGFRPAERLNETGRRLANYCERFKVPFEYNAIASRNWETIQVEDLKIESNEFLAVNCHKRFENLMDETIEVNSPRDAVLQLIRKINPDIFVQAIVNGSYNAPFFATRFREALFHFSAIYDMCDAVIPRDNEKRMKIEREIIGREVLNVVACEGFERIDRPETYKQWQARNTRAGFKQLPLNEELMAKFSAKLKEWYHKDFVLDEDGNWMLQGWKGRVLYASTCWVPA* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0469 750 Pfam GRAS domain family 372 747 IPR005202 -
Ahy13g0469 750 MobiDBLite consensus disorder prediction 279 317 - -
Ahy13g0469 750 ProSiteProfiles GRAS family profile. 363 748 IPR005202 -
Ahy13g0469 750 MobiDBLite consensus disorder prediction 344 358 - -
Ahy13g0469 750 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 75 749 - -
Ahy13g0469 750 MobiDBLite consensus disorder prediction 146 188 - -
Ahy13g0469 750 MobiDBLite consensus disorder prediction 280 307 - -
Ahy13g0469 750 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 75 749 IPR005202 -
Ahy13g0469 750 MobiDBLite consensus disorder prediction 138 188 - -
Ahy13g0469 750 MobiDBLite consensus disorder prediction 343 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0469 Ahy-Chr13 4820283 4823474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0469 91 750 GRAS Transcription Factor Family AT1G07530 48.873 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy13g0469 GRAS 1.40E-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0469 - - adu:107476834 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0469 13 4820283 4823474 Ahy13g0469 13 4820283 4823474 ECH
Ahy18g0380 18 3250249 3252748 Ahy13g0469 13 4820283 4823474 ECH
Ahy18g0382 18 3262521 3266017 Ahy13g0469 13 4820283 4823474 PCT
Ahy8g1189 8 27266781 27270145 Ahy13g0469 13 4820283 4823474 PCT
Ahy13g0469 13 4820283 4823474 Ahy18g0383 18 3280368 3283747 PCT
Ahy13g0469 13 4820283 4823474 Ahy8g1190 8 27285012 27288256 PCT