Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0468 ATGCCTTTGAAAATGGATCCTAATTTCAACTCCAGTTTCCTCAATGGATTTAGATTCAGGCAAGTTCCCACTATCCCCAATGTAGAGGAACAGTGCCCTGATCCTGTAAATGGGTTGGAAACCATGAACTTTGGATTCATGAATGACCCTTTTCTTCTTCCACCTGATCAAAACAATGCTCAAAATCCTACTTCTTCTGTTTCCACCATTACTACTGCAGATGAAGATTCTCCCTTGGATGACACCGATTTCTCTGCAACCGTACTACGATACATAAACCAGATGCTTATGGAAGAGGACATGGAGGAGAAGCCTTGTATGTTCCATGATCCATTGGCTTTACAAGCTGCTGAGAAATCATTGTATGATGCCATTGGTGGGACATACCCTCATCTTCCTCCTCATCCTCTTCCTCCTTCCATACAGCATCAAGCTCAAAACTACCACAATGTTGAAAGCCCTGATGATAGCCTCTCTAGTAACTTCAGTAGTTATAGTAGCAGCCTCAGCACCATTAGTACTAGCAACTTGGTTGAGTCACATTGGAGCAACTTTGACCCTTCAGAGTATAAGCCTTCTATACTGCAAACTTCCTTTCCTGCTGACTTTGTTTTTCAGGCGAGTTCAAACCCCGGCACACAGTCTTCCACGAACAATAGAAATAGCTTTACTACAGCCAACAATGGTGGTGGATTGTTGGGGAGTTCAGGTGCTGGATTTTTTGATTCATCATTTCTGAGCAAAAGTGAGTCCATGCTGCAGTTTAAGAGGGGAATGGAGGAAGCCAGTAAGTTTCTTCCTAAGGGGAATCCGCTGGTTATTGACTTGGAGAATAGCACCTTTAACCCTTCTTTCCAAAAGGCTCCTCAGCATGTGGACATTAAGGAGGAGAGAGATGAAAGGGAGTATTTTTCTGGTGAGTCAAAAGGGAGAAAGAATCACGAGCGGGAAGATCAAGTGGAATTACAAGATGGGAGGAGCAACAAACAGTCTGCGATTTACAGGGAAGACAGTGAGCTATCAGAATTGTTTGATAAAATACTGCTCGGCACAGGGTGTGGAAAAGAGGCACCTCCCAGATGCATTTGTGACGAAGACAAACCTAATGGGCAAGACAAGAATGTGCAGCAGAAGGAAGAAACAAACAAGTTTAGCAGTGGAAAGAATCGTGTTAAGAAACAAGGTAATAAGAAGGGAGTTGTTGATCTGAGGACCCTATTGGTTCTGTGCGCACAAGCTGTTTCATCTGATGATCATTCAACTGCTACTGAGTTATTGAAGCAGATTAGACAGCACTCTTCACGTCTAGGTGATGGGTCTCAGAGGCTGGCACATTGTTTTGCAAATGCCCTTGAAGCACGCTTGGCCGGCTCTGGCACCCAGCTATACACTTCTCTGACCTCCAAAAGAAAATCTGCTGCAGATATGGTGAAAGCATATCAAATGTTTATATCAGCCTGCCCATTCAAGAAGCTTGCTATCATTTTTGCTAACCATACAATTCTGAACCTAGCCAAGCCCAAGGAAGTGGAAACTCTTCATATTGTTGATTTTGGTATCCGTTACGGCTTCCAGTGGCCTGCCCTTATTTTTCGTCTATCAAATAGACATGGTGGTCCTCCCAAGCTGCGCATAACAGGGATCGAGCTTCCACAACCAGGTTTCAGGCCAGCAGAGAGAGTCCAGGAGACAGGGCGTCGCCTAGCTAAGTATTGTGAACGCTTTAATGTTCCTTTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAAAATTGAGGACCTTAAGATAAAGGAAAATGAACTTCTTGCAGTGAATTGTATGGTTCGGTTTAAGAATCTACTTGATGAGACTGTTGTGTTGAATAGTCCCAGGGATGCTGTCTTGAAATTAATTAGGAAGGCCAATCCTAATATATTTATACACGCTACTGTCAATGGGAACTACAATGCCCCATTCTTTGTGACACGGTTCCGGGAGGCTCTTTTTCATTACTCTACATTGTTTGATGTGCTTGACACCAATGTTGATCGCGAAGATCCAATGAGGTTGATGTTTGAGGAGGAGTTCTTTGGCAGGGAGGTAGTGAATATTATAGCTTGTGAGGGTTCTGAGAGGGTTGAGCGACCCGAAACATACAAGCAATGGCAGGTTCGGAATACAAGGGCAGGGTTTAGGCAACTCCCCTTGGATGACCACCTCATTCACAAACTAAGATGTAAACTGAAAGATGTGTACCATGGTGATTTCATGCTTGATGTGGATGGCAACTACATGCTTCAAGGTTGGAAGGGCCGAATCATTTATGCTTCCTCTTGTTGGGTACCAGCATAG 2337 0.4386 MPLKMDPNFNSSFLNGFRFRQVPTIPNVEEQCPDPVNGLETMNFGFMNDPFLLPPDQNNAQNPTSSVSTITTADEDSPLDDTDFSATVLRYINQMLMEEDMEEKPCMFHDPLALQAAEKSLYDAIGGTYPHLPPHPLPPSIQHQAQNYHNVESPDDSLSSNFSSYSSSLSTISTSNLVESHWSNFDPSEYKPSILQTSFPADFVFQASSNPGTQSSTNNRNSFTTANNGGGLLGSSGAGFFDSSFLSKSESMLQFKRGMEEASKFLPKGNPLVIDLENSTFNPSFQKAPQHVDIKEERDEREYFSGESKGRKNHEREDQVELQDGRSNKQSAIYREDSELSELFDKILLGTGCGKEAPPRCICDEDKPNGQDKNVQQKEETNKFSSGKNRVKKQGNKKGVVDLRTLLVLCAQAVSSDDHSTATELLKQIRQHSSRLGDGSQRLAHCFANALEARLAGSGTQLYTSLTSKRKSAADMVKAYQMFISACPFKKLAIIFANHTILNLAKPKEVETLHIVDFGIRYGFQWPALIFRLSNRHGGPPKLRITGIELPQPGFRPAERVQETGRRLAKYCERFNVPFEFNAIAQKWETIKIEDLKIKENELLAVNCMVRFKNLLDETVVLNSPRDAVLKLIRKANPNIFIHATVNGNYNAPFFVTRFREALFHYSTLFDVLDTNVDREDPMRLMFEEEFFGREVVNIIACEGSERVERPETYKQWQVRNTRAGFRQLPLDDHLIHKLRCKLKDVYHGDFMLDVDGNYMLQGWKGRIIYASSCWVPA* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0468 778 MobiDBLite consensus disorder prediction 359 387 - -
Ahy13g0468 778 Pfam GRAS domain family 403 775 IPR005202 -
Ahy13g0468 778 MobiDBLite consensus disorder prediction 284 334 - -
Ahy13g0468 778 MobiDBLite consensus disorder prediction 359 395 - -
Ahy13g0468 778 MobiDBLite consensus disorder prediction 290 334 - -
Ahy13g0468 778 MobiDBLite consensus disorder prediction 56 81 - -
Ahy13g0468 778 ProSiteProfiles GRAS family profile. 394 776 IPR005202 -
Ahy13g0468 778 PANTHER SCARECROW-LIKE PROTEIN 14 62 777 - -
Ahy13g0468 778 MobiDBLite consensus disorder prediction 56 75 - -
Ahy13g0468 778 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 62 777 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0468 Ahy-Chr13 4815347 4818714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0468 88 778 GRAS Transcription Factor Family AT1G07530 55.650 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy13g0468 GRAS 4.60E-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0468 - - ahf:112736647 1511.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0468 13 4815347 4818714 Ahy13g0468 13 4815347 4818714 ECH
Ahy18g0382 18 3262521 3266017 Ahy13g0468 13 4815347 4818714 ECH
Ahy18g0383 18 3280368 3283747 Ahy13g0468 13 4815347 4818714 PCT
Ahy8g1190 8 27285012 27288256 Ahy13g0468 13 4815347 4818714 PCT