Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0467 ATGGTGCTGCAGAAGAGGTTAGACTATGGATTTAATGGCTACGAAGCACCAGCTGTTCCACGCGCTACCCGAACAACTAGAAGGAGAACCAAATTTCAAAGAAGAGTCCAAGATGATCAAATGTGCGCCATTGATTTATTGGCCACCCTAGCAGGTAAATTCTTTTTCCAAGATAAAGGGAATCCAACCATGCCTAGTGATGCATCAACAGATAAGGATCAGCATGGATTTGTTGAAGGGTGCCAAGATTCAGACAAACCTCTCAAAGATGAGCTTTTTTACAAACGAAGTTTTGACAACAACCACTTCCCTCACTTTTCTTCCCAAACAAACAAACAAAATTGTCCATTGAATGAACTCCAAAATCACGAAATTGATGTCCATTTAGGCAATGCTTCTGTAATAATAAGTTCCTGTAGCTCAGAAAGGCTAGTTTCTGAGAAATTAGTGGATGCCAGATGCCCTAACAAAATGGAAAATTTTACTAGCAAAGACATATTAGGTTCTTCTGGTCATCCAGTGGTTAATTGTTGTAAATTAGATGGTGAAAGTAAAACTAATAAACTAAAGGATAAGCTGCATAAGCTTGAGAAGGTTTCAATTGATCTTGGGACTAAGATGCGTGGTTTTGAGGATCCATCAACTGAAAAGCCTCCTAGACGGATCAGTTTAGGTAGCAAAGCCAAGTTGTCGAAGTATGTTGACATATTTTCCTATAGCTCATTGCCCAAAGGCTGTGACAATGTGTCAGCAGTTAGAAGAGATGATGACGAAAACTTTTCTGGGTCTACTCACCCTTGTACAAAAACGAAGTCCTTTATGCCAGTGACTGGTATACATGGTAGAAGACTAAGGAAATTATTGACTTGTAAATATGGCAAAGTTGCTCAGGAGTCGAAGAATGATACACTTGCTAGCAGTGATGAAACTTTGAAGTCAACTTACTCTAGTAAGAAGAACTACTATAAACGCCAAAGATCTCAGATGAATATTCCTTTCAAAAAGCGGAGGCGGTTTCATTGTAGCTCTGTTTCAAATTCCAGTGGATTTATAAGAAGTGCTGACATTTATTATTCACCTGAGAGTGACTGTGGAATACCAGTCTTGGAATCCCCACTAGGATGTAGAAGAGGTGATCCTGTGAATATTAGGATCAAGTCATTTACAGTCCCAGAGCTTTTTATTGAGATTCCAGAAACTGCTACCGTAGGATCCTTGAAGAGGACAGTTATGGATGCAGTAACTACTGTGCTTGGAGGTGGATTACACGTTGGTGTCGTACTTCAAGGAAAGAAAGTTAGAGATGACAGTAAAACTCTACTTCAAGCTGGAATATCCCATGATAACCAGTTGGATGCTTTGGGTTTCACATTGGAGCCTAATGTTTCACAAAGCCTACCACCTCTACATGCTTCAACATCACATTCTCTAATAAGGTATCCTTCCAATCCAGCTGTAACTCATCAGAGGACTCGAGGTATTTCTGACATGTTACTTGATCATCAAGTAACCAGTTTAGGTAACCATGTTGAAAGTGAGCATGATTCAGCACCTTCTCTAATCAACAAAGTTAAGGAGAAGAGTACCGTAGATTCTAAACAACTGGTTTCTTTTCCTGAAATGAGTAAGGATGAAAAAGTTATGATACCTGTGGTCCAGAAGTCAAAGCGATCTGAGATTTTGCAGCGGCGAATTCGTCGGCCTTTTTCAGTTGATGAAGTGGAAGCACTGATTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGCGATGTTAAATGTCATGCTTTCGGTAACGTGGACCATCGGACATATGTGGATTTAAAGGATAAATGGAAAACACTGGTGCACACGGCAGGAATATCCCCTCGGCAAAGAAGGGGAGAGCCTGTTCCCCAAGATCTTTTGGACAGGGTCCTAAAAGCACAAGCATATTGGTCCCAGCACCAAACTAAGCAACATCACGAAACTAACCTCTTAGATCAAGGGTTGCCAATAGGACCTGGCTATGTACATGGGATAACTGCATAG 2031 0.4092 MVLQKRLDYGFNGYEAPAVPRATRTTRRRTKFQRRVQDDQMCAIDLLATLAGKFFFQDKGNPTMPSDASTDKDQHGFVEGCQDSDKPLKDELFYKRSFDNNHFPHFSSQTNKQNCPLNELQNHEIDVHLGNASVIISSCSSERLVSEKLVDARCPNKMENFTSKDILGSSGHPVVNCCKLDGESKTNKLKDKLHKLEKVSIDLGTKMRGFEDPSTEKPPRRISLGSKAKLSKYVDIFSYSSLPKGCDNVSAVRRDDDENFSGSTHPCTKTKSFMPVTGIHGRRLRKLLTCKYGKVAQESKNDTLASSDETLKSTYSSKKNYYKRQRSQMNIPFKKRRRFHCSSVSNSSGFIRSADIYYSPESDCGIPVLESPLGCRRGDPVNIRIKSFTVPELFIEIPETATVGSLKRTVMDAVTTVLGGGLHVGVVLQGKKVRDDSKTLLQAGISHDNQLDALGFTLEPNVSQSLPPLHASTSHSLIRYPSNPAVTHQRTRGISDMLLDHQVTSLGNHVESEHDSAPSLINKVKEKSTVDSKQLVSFPEMSKDEKVMIPVVQKSKRSEILQRRIRRPFSVDEVEALIQAVEKLGTGRWRDVKCHAFGNVDHRTYVDLKDKWKTLVHTAGISPRQRRGEPVPQDLLDRVLKAQAYWSQHQTKQHHETNLLDQGLPIGPGYVHGITA* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0467 676 Pfam Myb-like DNA-binding domain 566 615 IPR001005 -
Ahy13g0467 676 SUPERFAMILY Ubiquitin-like 378 466 IPR029071 -
Ahy13g0467 676 Gene3D - 554 658 - -
Ahy13g0467 676 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 656 IPR031105 -
Ahy13g0467 676 ProSiteProfiles Myb-like domain profile. 561 616 IPR001005 -
Ahy13g0467 676 SUPERFAMILY Homeodomain-like 567 648 IPR009057 -
Ahy13g0467 676 SMART sant 565 618 IPR001005 -
Ahy13g0467 676 CDD SANT_TRF 567 617 - -
Ahy13g0467 676 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 561 620 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0467 Ahy-Chr13 4808168 4812953 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy13g0467 Myb_DNA-binding 1.70E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0467 - - gmx:100797436 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0467 13 4808168 4812953 Ahy13g0467 13 4808168 4812953 ECH
Ahy13g0467 13 4808168 4812953 Ahy17g1072 17 14387798 14393027 ECH
Ahy14g1627 14 87208182 87214604 Ahy13g0467 13 4808168 4812953 ECH
Ahy18g0385 18 3296454 3303048 Ahy13g0467 13 4808168 4812953 PCT
Ahy8g1191 8 27301994 27307229 Ahy13g0467 13 4808168 4812953 PCT
Ahy13g0467 13 4808168 4812953 Ahy18g0385 18 3296454 3303048 PCT
Ahy13g0467 13 4808168 4812953 Ahy8g1191 8 27301994 27307229 PCT