Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0450 ATGAGAAGATATTTTTGCCATCTTCATTGTAGTATCCACCATAAATTAAAAGACAACATCCATCACATTCAGATTATAATGGAGGACGGAGGGAGTTCAAGGTGGAACCCTACGAAGGAGCAGATAAGCATGTTGGAGAATCTTTATAAGCAGGGAATAAGAACCCCAAGCGCTGAAGAGATTCAGCAAATAACAGCCAGGTTGAGAGCCTATGGTCACATCGAAGGCAAGAACGTCTTCTACTGGTTTCAGAATCACAAAGCCAGACAGAGGCAGAAGCAGAAGCAACACACTCTTGCTTACTTCAATCGCTCTTTTCTCCATCATCATCATCATCAACCTGCAGTTATGTGTGGTCCGTATTGCATGGTAGGTATGATGAGGAGAATCCCCGATAATAATCATAGTGAAGAAGAAACAATGTTTGATTATGATGATGATGATAAGCAACAAGATAGAACGTTGGATCTTTTCCCTCTTCACCCAACTGGCATCTTGGAAGGGAAGAAGGAAACACAAGATAACAACAACAACAACAACATGATGACCATGATGTGCTCTTTCATGGCGCCTTCTTCTTCATCATCGTCATCACTTTCCACTGATGATGGACATGGCTATAGGCACCAACAACAACAACAACTACCCTTCTTTGATTTCTTCGTCACTTCTGGACATGGACAAGGATCCTAA 693 0.4185 MRRYFCHLHCSIHHKLKDNIHHIQIIMEDGGSSRWNPTKEQISMLENLYKQGIRTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQHTLAYFNRSFLHHHHHQPAVMCGPYCMVGMMRRIPDNNHSEEETMFDYDDDDKQQDRTLDLFPLHPTGILEGKKETQDNNNNNNMMTMMCSFMAPSSSSSSSLSTDDGHGYRHQQQQQLPFFDFFVTSGHGQGS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0450 230 CDD homeodomain 34 94 IPR001356 GO:0003677
Ahy13g0450 230 ProSiteProfiles 'Homeobox' domain profile. 28 93 IPR001356 GO:0003677
Ahy13g0450 230 SMART HOX_1 30 97 IPR001356 GO:0003677
Ahy13g0450 230 Gene3D - 32 101 - -
Ahy13g0450 230 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 29 124 - -
Ahy13g0450 230 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 138 226 - -
Ahy13g0450 230 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 29 124 IPR044555 GO:0003700|GO:0099402
Ahy13g0450 230 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 138 226 IPR044555 GO:0003700|GO:0099402
Ahy13g0450 230 SUPERFAMILY Homeodomain-like 29 99 IPR009057 -
Ahy13g0450 230 Pfam Homeodomain 33 92 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0450 Ahy-Chr13 4623706 4624797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0450 32 108 Wox Gene Family AT5G59340 84.416 2.63e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy13g0450 Homeodomain 2.90E-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0450 - - ahf:112736626 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0450 13 4623706 4624797 Ahy13g0450 13 4623706 4624797 ECH