Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0448 ATGGCTAAGACACTCATCTCCTCTCCCTCCTTCATCGGAACTCCACTCCCCTCCCTCCACCGCCACCGCTTCCCCCACCGCCCTGCCAGACTCAAAGTCAACTTCAGCCTCCACCAGATTCCACCAATCCACTCCCTCACCCACTCTTTCCACTTCGATGAAGTCGTCGCCAGAGCCGAAGGCCTTCTCTACACGCTCGCCGACGCTGCTGTCGCCACCGCCGACTCTGCTGCCACCGCCACCGGGACTTCCACCGATGCCGCCGCCGACACCGTGCAGAAGAACGGAGGCTGGTTCGGATTCATCTCCGAAGCCATGGAGTTTGTTCTCAAGGTGTTAAAGGATGGTCTTTCTGCTGTGCATGTACCTTATGCATATGGATTTGCTATCATATTGCTCACAGTTGTGGTTAAGGCTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAACACTAGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGCTATATAGACAGGCTGGGGTTAACCCATTGGCAGGTTGTTTACCAACATTGGCTACAATTCCAGTATGGATTGGTCTTTACCAAGCTTTATCAAATGTTGCAAATGAGGGATTGTTAACAGAAGGTTTCTTTTGGATCCCATCTCTTGGAGGTCCTACTACCATAGCTGCTAGACAAAGTGGAGCTGGAATTTCTTGGCTTTTCCCTTTTGTGGATGGTCATCCACCATTGGGTTGGCAGGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTGTTGTTTCTCAATACGTCTCCATGGAAGTCATGAAGCCACCTCAGACGAATGATCCTACCCAAAAGAATACACTTCTTATTTTCAAGTTTCTTCCACTCATGATTGGTTACTTCTCTCTCTCTGTTCCATCCGGGCTAACAATTTACTGGTTTACAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTAGGAGGTGCAAAACCTGTTGTAGATGAAAATGCTGGTGGAATTATCACAGCAGGACGTGCTAAAAGATCAGCTTCCCAGCCAGCTAAAGCTGGTGAAAGATTTAGGCAGTTAAAAGAAGAGGACAAAAAGAAAAAGTCAAGCAAGGCACTACCAGTGGAAGAAGTTCAACCTTTGGCATCTACTACTGATTCTGATGATGGCTCAGATGAAGAGAGTAACAAGGGATCAGAAGCTGCACAAGAAGAAGCATATGCTTCTACAGTTGGCAAAGATTCTAGGGAAAGAAGAAGCAAGCGCTCGAAACGGAAGCGGGCTGTATAA 1344 0.4673 MAKTLISSPSFIGTPLPSLHRHRFPHRPARLKVNFSLHQIPPIHSLTHSFHFDEVVARAEGLLYTLADAAVATADSAATATGTSTDAAADTVQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVVVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEVMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKPVVDENAGGIITAGRAKRSASQPAKAGERFRQLKEEDKKKKSSKALPVEEVQPLASTTDSDDGSDEESNKGSEAAQEEAYASTVGKDSRERRSKRSKRKRAV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0448 447 PANTHER OXA1 1 440 IPR001708 GO:0016021|GO:0032977
Ahy13g0448 447 MobiDBLite consensus disorder prediction 367 391 - -
Ahy13g0448 447 MobiDBLite consensus disorder prediction 359 447 - -
Ahy13g0448 447 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 126 339 IPR028055 -
Ahy13g0448 447 Pfam 60Kd inner membrane protein 126 340 IPR001708 GO:0016021|GO:0032977
Ahy13g0448 447 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0448 Ahy-Chr13 4607852 4612395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0448 33 396 Chloroplast and Mitochondria Gene Families AT2G28800 71.429 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0448 K03217 - gmx:100817173 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0448 13 4607852 4612395 Ahy13g0448 13 4607852 4612395 ECH