Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0405 ATGATGTGGAGTTTTAGAGAACTTGGTTTATTAACATGTGCCTTGTCAATCTTGCCCTTATTTTGTTCTGCTGGAAAGTTTGTGCCTATAGATAATTACCTTATAGACTGTGGATCACCTTCCAATACTACAGTAGGTAGTCGAAATTTCGCAGCAGATAGCTTTTTTAAGAATTTGGTTTCCACCAATCAAGACATTCTTGCTAATACCTTGAATTTAAATGGTGATTCCCCTCTCTATAGGACGGCGAGGATTTTCGTCGGATCCTCTGAGTACACGTTCCCTATTAACCAAAAGGGGAGACATTGGATCAGGCTTTATTTCTTTCCATTTGATTTTGGAAAGTACAAATTGAGTACTGCAAATTTTGCTGTTATCGGACAAGATACTATACTTCTTGGTAACTTCAGTGTCCAGAAGAATCCTGTTATGAAGGAGTTCTCTTTGAATGTGAGCTCAGACACATTTGTGATCACTTTCATGCCATCAAACAACTCAATAGCCTTTGTCAATGCAATTGAAGTTGTTTCAGTTCCAGATGACCTCATTGTTGATGATGCTTACACCTTAAAACCATCATTAGCACCTTATTATGGGTTGTATTCACAAGCATTAGAGACTGTTTACAGGGTTAACATGGGTGGTCCCAAAGTCTCTGCCGACAATGACACCCTTCAACGAATTTGGGTTCCGGATCAGAGCTTCCTTATAAACTCAAACCTTGCAACTAGTAATTCAAACATTGCTGCTGTTAAGTACACAGAAGGTGGGCCAACCGAAAACACTGCTCCACCAGTTGTCTATGGTACTCTTAGACAGATGAATTCGATGTACGATCCCCGGTTTATTTTCAATGTGACATGGCAGTTTGATGTGGATCCTGGATTTGAGTACTTTCTTAGGCTTCATTTCTGTGATGTAATCAGTAGAAGTCTTAATGAACTCTATTTCAATGTTTACATTGACTCTTCTTATGCTGCCAAGGATCTTGATCTCAGTACAGAAACTAATAATGTTTTGGCTGCTCCATATTTTAAGGATTTGGTTACTCTCCCAACTGTTAGCAACCGAATTCGTGTGAGTATCGGTCCATCACTGACAAATACAGAGTATCCTAATGCCATATTGAATGGGCTGGAAATCATGAAAATGAACAACTCTATGAACAGTCTTAGTACAGCTACAATGGTGCCTGTAACAAGTGGTTCTGGTTCGAATTCTAAGAAAGTTGGGGTGATAGTTGGTTCGATTCTCGGGGCATGTAGTGTGATTGTCTTGATTGGAGTTTTATTTGTAATATACATGAAAAGGAGGAAGTTGGCACAGCAAAGACATTCAAAAACATGGATTCCAATATCTGTCAATGATGGAACTTCTCACACCATAGGAAGTAAATATTCTAATGGCACAACAGCAAGTGCGGCCACAAATTGTGGCTACCGCATTCCTTTCTTGGCTGTTCAGGAAGCTACAAACAGTTTTGATGAGAATTTGGTTATCGGCATAGGTGGTTTTGGCAAAGTATACAAGGGAGAATTGAGTGATGGAACTAAAGTTGCAGTTAAGAGAGGGAATCCTCGGTCGCAACAGGGTGTAGCCGAGTTTAGGACTGAAATCGAAATGTTGTCTCAATTCAGGCATCGACATTTGGTGTCACTGATTGGATATTGTGATGAAATGAATGAAATGATATTGATTTATGAATATATGGAGAAGGGAACTCTTAAGAGTCATTTGTATGGTTCCGGTCTTCCAAGCTTGAGTTGGAAAGAGAGGCTTGAGATATGCATAGGAGCTGCTCGGGGACTTCATTATCTTCATACCGGCTATGCAAAGGCGGTAATTCACCGCGATGTGAAGTCTGCAAACATCCTACTTGATGAGAACCTTATGGCAAAAGTAGCTGATTTCGGGCTATCAAAAACTGGTCCGGAAATTGACCAGACTCATGTTAGCACAGCTGTCAAGGGGAGCTTTGGATACCTTGATCCGGAGTATTTCCGAAGACAACAACTAACTGAGAAGTCAGATGTATATTCATTTGGGGTGGTACTCTTTGAAGTTCTTTGTGCAAGACCGGTCATAGACCCTTCCCTATCGAGGGAAATGGTGAACTTGGCAGAATGGGCGTTGAAGTGGCAGAAAAAAGGTCAGTTGGAACAGATCATAGATCCTACATTGACCGGGAAAATAAGACCGGATTCTCTCAGGAAGTTTGGCGAAACAGCCGAGAAATGCCTAGCTGAATTCGGTGTTGATAGGCCTTCTATAGGAGATGTCTTGTGGAATCTAGAGTATGCTCTCCAACTTCAGGAGGCTGTTTTTCAAGGTGATCCGGAAGAAAATAGCACCAACATGATCGGCGATCTCTCGCCCCAGATCAACAATTTTAGCCGCGAAGAAAGCGTTTCGGCCGCCCAATTTGAATTTCCAAGCCTTAATGATCTTTCTGGTGTTTCTATGAGTAAGGTGTTCTCACAGCTGGTGAAATCTGAAGGGCGATGA 2505 0.4136 MMWSFRELGLLTCALSILPLFCSAGKFVPIDNYLIDCGSPSNTTVGSRNFAADSFFKNLVSTNQDILANTLNLNGDSPLYRTARIFVGSSEYTFPINQKGRHWIRLYFFPFDFGKYKLSTANFAVIGQDTILLGNFSVQKNPVMKEFSLNVSSDTFVITFMPSNNSIAFVNAIEVVSVPDDLIVDDAYTLKPSLAPYYGLYSQALETVYRVNMGGPKVSADNDTLQRIWVPDQSFLINSNLATSNSNIAAVKYTEGGPTENTAPPVVYGTLRQMNSMYDPRFIFNVTWQFDVDPGFEYFLRLHFCDVISRSLNELYFNVYIDSSYAAKDLDLSTETNNVLAAPYFKDLVTLPTVSNRIRVSIGPSLTNTEYPNAILNGLEIMKMNNSMNSLSTATMVPVTSGSGSNSKKVGVIVGSILGACSVIVLIGVLFVIYMKRRKLAQQRHSKTWIPISVNDGTSHTIGSKYSNGTTASAATNCGYRIPFLAVQEATNSFDENLVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGVAEFRTEIEMLSQFRHRHLVSLIGYCDEMNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLSREMVNLAEWALKWQKKGQLEQIIDPTLTGKIRPDSLRKFGETAEKCLAEFGVDRPSIGDVLWNLEYALQLQEAVFQGDPEENSTNMIGDLSPQINNFSREESVSAAQFEFPSLNDLSGVSMSKVFSQLVKSEGR* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0405 834 SMART serkin_6 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0405 834 Gene3D Phosphorylase Kinase; domain 1 457 569 - -
Ahy13g0405 834 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 19 803 - -
Ahy13g0405 834 SUPERFAMILY Protein kinase-like (PK-like) 474 765 IPR011009 -
Ahy13g0405 834 Gene3D Transferase(Phosphotransferase) domain 1 570 787 - -
Ahy13g0405 834 ProSiteProfiles Protein kinase domain profile. 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0405 834 PANTHER OS07G0166700 PROTEIN 19 803 IPR045272 GO:0004714|GO:0006468
Ahy13g0405 834 Gene3D - 203 386 - -
Ahy13g0405 834 Gene3D - 32 179 - -
Ahy13g0405 834 CDD STKc_IRAK 500 765 - -
Ahy13g0405 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Ahy13g0405 834 Pfam Malectin-like domain 35 384 IPR024788 -
Ahy13g0405 834 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Ahy13g0405 834 Pfam Protein tyrosine and serine/threonine kinase 499 692 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0405 Ahy-Chr13 4204435 4207938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0405 7 834 Receptor kinase-like Gene Family AT3G46290 65.191 0.0 1097
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ahy13g0405 Malectin_like 3.30E-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0405 - - gmx:100806488 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0405 13 4204435 4207938 Ahy13g0405 13 4204435 4207938 ECH
Ahy18g0434 18 3742453 3745949 Ahy13g0405 13 4204435 4207938 ECH
Ahy18g0434 18 3742453 3745949 Ahy13g0405 13 4204435 4207938 PCT
Ahy8g1236 8 27749427 27752917 Ahy13g0405 13 4204435 4207938 PCT
Ahy13g0405 13 4204435 4207938 Ahy18g0434 18 3742453 3745949 PCT
Ahy13g0405 13 4204435 4207938 Ahy8g1236 8 27749427 27752917 PCT