Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0404 ATGTATACACACAATAATAACTGTAACGGCACATTCTGTTACGCCAATAACGACGACCATTTCCATCACATGATAACGGCAATGCATTCGTCGCCGTCGAGCGGAGCCGCATCTCATCAATGGCAATTGATGATGACGAACCAGTCGGAAGCGAGCATGAGCGCAAGCAGCGGGTGTAGCACGCCGAGTTCGTTGGCGAGTTGCGGTGACACCACTAGTCAGCGCGTGAGCGCCACGAAGATGCACAAGAGCGTGAGTAGCCACTCGCTGTTCTTGCAGAATAACAATAGCAGTGGGGTCCACCAAAACCGTAATCAGTTGTATCCATCCTTCTCTGCTCTTTTCTGCGAGTTTCTTAATTCCGATGACGCTCCCGTTCGCAGGGTTTACAGCACCGGTGATCTTCAGGAAGATACTTCACTATCAAGTGAGAGTAGTATGATAATAGAAGCAATGAGCAGAGCCAGTCCCTATAGTCCTGAAGAGAAGAAGATAAGAATTGAGAGATACAGAATCAAGAGAAACCAGAGGAACTTCAACAAGAAAATCAAGTATGCTTGTAGAAAAACATTGGCGGATAGCCGGCCGCGAATCAGAGGACGATTTGCGAAGAATGATGAAATTGTGAGAAACCCTCCATCACTTGAATGGTGCCAATTTGGTGCTGCTGGGGAGGAAAAAGATGAAGAAGATGAGAATAATTGGGTCAATTTATTTGATTCCTTAGACCCTGCAAATGTTGCTGCTCATCATCATCAAGAGCAACAAGATAGTTCCCCTTTCAGTGTATTCTACTAA 798 0.4586 MYTHNNNCNGTFCYANNDDHFHHMITAMHSSPSSGAASHQWQLMMTNQSEASMSASSGCSTPSSLASCGDTTSQRVSATKMHKSVSSHSLFLQNNNSSGVHQNRNQLYPSFSALFCEFLNSDDAPVRRVYSTGDLQEDTSLSSESSMIIEAMSRASPYSPEEKKIRIERYRIKRNQRNFNKKIKYACRKTLADSRPRIRGRFAKNDEIVRNPPSLEWCQFGAAGEEKDEEDENNWVNLFDSLDPANVAAHHHQEQQDSSPFSVFY* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0404 265 ProSiteProfiles CCT domain profile. 163 205 IPR010402 GO:0005515
Ahy13g0404 265 PANTHER CCT MOTIF PROTEIN 44 265 - -
Ahy13g0404 265 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 44 265 IPR045281 GO:0009909
Ahy13g0404 265 Pfam CCT motif 166 205 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0404 Ahy-Chr13 4192913 4195386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0404 154 204 C2C2-CO-like Transcription Factor Family AT5G24930 54.902 8.33e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy13g0404 CCT 6.70E-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0404 - - adu:107477092 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0404 13 4192913 4195386 Ahy13g0404 13 4192913 4195386 ECH
Ahy18g0437 18 3756180 3757681 Ahy13g0404 13 4192913 4195386 PCT
Ahy8g1239 8 27786979 27788512 Ahy13g0404 13 4192913 4195386 PCT
Ahy13g0404 13 4192913 4195386 Ahy18g0437 18 3756180 3757681 PCT
Ahy13g0404 13 4192913 4195386 Ahy8g1239 8 27786979 27788512 PCT