Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy13g0394 | ATGCAAATGGAAAAGGAAAACCAAAACGGCGATATCGCACTTGATTCCAAATACGTTCGCTACAACATTCTTGGAAACTTGTTCGACGTTTATGCTCACTACGTTCCTCCCATTCAACCCGTTGGTCGTGGCGCTTACGGCGTCGTTTGCTGCGCGACGAATTCGGAGACCAAAGAAGGTGTTGCCATCAAGAAGATCGGGAATGCCTTTGACAACCGGATCGATGCCAAGAGGACTCTCCGGGAAATCAAGCTCCTCTGTCACATGGACCATGATAATGTGATTAAGATAAAGGATATAATAAGGCCAGCGGAGAGGGAAAAGTTCAATGATGTGTACATAGTTTATGAGCTGATGGACACTGATCTCCATCAGATTATTCAGTCTAACCAGCCTCTCACTGATGATCACTGCCAGTATTTCTTATACCAGCTCTTGAGAGGATTAAAGTATGTACACTCTGCCAATGTTTTGCACCGAGATCTAAAGCCAAGCAATTTACTTCTCAATGCAAACTGTGATCTCAAAATATGTGACTTTGGGCTTGCCAGAACAACATCTGAGACAGATTTTATGACAGAATATGTTGTCACTCGTTGGTACAGAGCCCCTGAATTGCTATTGAACTGTTCAGAATATACTGCAGCGATTGATATCTGGTCTGTTGGATGTATTTTGATGGAAATAATTAGAAGGGAGCCTTTGTTTCCTGGTAAAGATTATGTTCAGCAGTTGGCACTTATAACTGAGTTACTAGGTTCACCAGATGAATCGGATCTTGGATTCCTCAGAAGTGAGAATGCAAAGAAATATGTTAAGCAGCTCCCACATGTAGAAAAGCAGCCATTTGCGCTGAGGTTTCCTGATGTGTCTCCATTGGCAATTGATCTTGCTGAGAAAATGTTGGTCTTTGATCCCTCAAAACGCATAACTGTTGAGGAAGCACTGAATCACCCATATTTGGCAAGCCTTCATGAGATCAATGAGGAGCCCACTTGCCCGAGTCCATTCATCTTTGATTTTGAACAGACAAGTCTGAATGAAGAAGATATAAAGGAGCTCATATGGCAAGAGTCTCTGAACTTCAGCCAGGATCAGATGCTTGAATAA | 1110 | 0.4261 | MQMEKENQNGDIALDSKYVRYNILGNLFDVYAHYVPPIQPVGRGAYGVVCCATNSETKEGVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNVIKIKDIIRPAEREKFNDVYIVYELMDTDLHQIIQSNQPLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPDESDLGFLRSENAKKYVKQLPHVEKQPFALRFPDVSPLAIDLAEKMLVFDPSKRITVEEALNHPYLASLHEINEEPTCPSPFIFDFEQTSLNEEDIKELIWQESLNFSQDQMLE* | 370 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy13g0394 | 369 | Gene3D | Phosphorylase Kinase; domain 1 | 18 | 358 | - | - | |
| Ahy13g0394 | 369 | Gene3D | Transferase(Phosphotransferase) domain 1 | 119 | 348 | - | - | |
| Ahy13g0394 | 369 | ProSitePatterns | MAP kinase signature. | 70 | 173 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
| Ahy13g0394 | 369 | ProSiteProfiles | Protein kinase domain profile. | 35 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Ahy13g0394 | 369 | SMART | serkin_6 | 35 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Ahy13g0394 | 369 | ProSitePatterns | Protein kinases ATP-binding region signature. | 41 | 65 | IPR017441 | GO:0005524 | |
| Ahy13g0394 | 369 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE 13 | 13 | 367 | - | - | |
| Ahy13g0394 | 369 | CDD | STKc_TEY_MAPK | 28 | 363 | - | - | |
| Ahy13g0394 | 369 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 13 | 367 | - | - | |
| Ahy13g0394 | 369 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 157 | 169 | IPR008271 | GO:0004672|GO:0006468 | |
| Ahy13g0394 | 369 | Pfam | Protein kinase domain | 39 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Ahy13g0394 | 369 | SUPERFAMILY | Protein kinase-like (PK-like) | 38 | 327 | IPR011009 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy13g0394 | Ahy-Chr13 | 4067880 | 4070835 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy13g0394 | 3 | 362 | MAP Kinase Gene Family | AT1G07880 | 79.167 | 0.0 | 618 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | CMGC_MAPK | Ahy13g0394 | Pkinase | 2.90E-71 | CL0016 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy13g0394 | 13 | 4067880 | 4070835 | Ahy13g0394 | 13 | 4067880 | 4070835 | ECH |