LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy13g0389	ATGGAACGGCTCCCGCCGATGGATCTGATGCGCTCCGAGAAGATGACGCTCGTCCAACTCATCATTCCCGCCGAGTCCGCTCACCGAGCCGTCTCCTATCTCGGCGAACTCGGCCTCCTCCAATTCCGAGACTTAAATGCTGAGAAAAGTCCCTTTCAGAGAACGTTTGTTAACCAGGTGAAGCGATGTGCAGAAATTTCAAGAAAGCTACGATTCTTCAAGGATCAAATCAGTAAAGCTGGTGTAGTATCTTCTGATCCAGTAATGCAGCCAGATATTCACTTGGAGGATTTAGAGATACAACTTGCTGAGCATGAACATGTGCTAACTGAAATGAATTCTAACAGTGAGAAACTTCAGCAATCATATATGGAACTCTTGGAGTTCAAAGTTGTATTGCAAAAGGCATCTGCTGTTCTATTTTCAAATCATGGCCATGCTGTTCCAGAAGAGAGAGAACTAGAGGAGAATATTAACTCAAAAGGAGATTATGTTGAGACACCATTTTTGTTTGAACAGGAAACGAGTATGGAGCCAACAAATCAATCTGGTTTAAGATTTATCAGCGGCACAATTTGTAAATCCAAAGTTCTTAACTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAACATGCTGTTCAATCAGGAACCAGCTGATGACCAACTCATGGATCCTATTTCAAATGAGATGATAGAGAAAGCAGTATTTGTGGTGCTTTTCTCTGGGGAGCGAGCAAGAACAAAGATTCTGAAAATTTGTGAGGCGTTTGGGGCACATAGTTACCCTGTCCCTGAAGATATAAGTAAACAGAGGCAGATAATTAACGAGGTTTCATCACGTCTTGCTGACATAGAAGCTACTTTGGATGCTGGGACTAGGCACCGGAATAAGGCTCTAGCTTCTGTAGGAGATAATGTTGAAAAATGGATGGACATGGTAAGAAGAGAGAAAGCCGTCTATGATACGTTGAACATGCTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGGGAAGGATGGTGCCCTATATCTGCAACAGCACAGATTCAGGAGGCATTGCAACGTGCAACTTTTGATAGCAATTCACTAGTTGGCATAATCTTTCATTCAATGGATGCACTGGAATCTCCGCCTACATATTTTAGGACCAACAATTTCACAAGCCCATATCAGGAAATCGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCGAATCCTGCAGTTTACACGGTTATTACATTCCCATTTCTTTTCGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTATTGCTTGGAGCATTAGTCCTTATAGCATGTGAAAAAAAGCTCAGCGCTCAGAGACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGCTTCTTTTAATGTCATTATTTTCAATCTACTGTGGGTTAATCTACAATGAATTTTTCTGTGTTCCTTTTCACATATTTGGAGCGTCGGCTTACAAATGCCGAGATAATTCATGCAGGGATGCGCATACCATTGGTTTAGTCAAATATCGAGAAACATACCCATTTGGTGTGGATCCCAGATGGCGTGGAAGTCGTTCAGAATTGGCTTTCCTTAACTCCCTCAAGATGAAGATGTCCATTCTACTTGGTGTGGTGCATATGAACTTAGGAATTCTGTTGAGTTATTTCAACGCTTGTTTTTTTGGTAACTCAATAGATATAAGGTACCAGTTTGTGCCACAAATGATTTTCCTCAACAGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGCTCACAAGCGGACCTCTATCATGTAATGATTTACATGTTTTTAAGCCCGTTTGAGAAACTTGGTGAGAATCAGTTATTCTGGGGCCAAGGGGTACTTCAAGTAGTTTTGTTACTTTCTGCTCTAATTGCAGTTCCTTGGATGCTCTTTCCAAAACCTTTTATACTAAAGAAGCTTTATGATGAGAGATTTTTTCAAGGGCAAACTTATGGTAAGCTTAATACAACTGAGATGGACCCTGAGGTGGAACCAGGTTCAGCAGGGCAACATCAGGAGGAATTCAATTTCAGTGAGGTCTTTGTCCACCAAATGATTCACGCCATTGAGTTTGTTCTAGGCTCAGTTTCAAATACAGCATCTTATCTTCGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCAACTGTTTTTTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGAAAATCTCATCATTCGGATAATAGGGCTAGTTGTTTTTGCCTTTGCAACTGCCTTTATACTACTCATGATGGAGAGTCTGAGTGCGTTTCTTCATGCCCTGCGTCTTCATTGGGTAGAATTTCAAAATAAATTCTACTATGGCGATGGCTACAAGTTCAAACCTTTTTCCTTTGCCTCCTTAATAGATGATGAAAATTGA	2448	0.4126	MERLPPMDLMRSEKMTLVQLIIPAESAHRAVSYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEISRKLRFFKDQISKAGVVSSDPVMQPDIHLEDLEIQLAEHEHVLTEMNSNSEKLQQSYMELLEFKVVLQKASAVLFSNHGHAVPEERELEENINSKGDYVETPFLFEQETSMEPTNQSGLRFISGTICKSKVLNFERMLFRATRGNMLFNQEPADDQLMDPISNEMIEKAVFVVLFSGERARTKILKICEAFGAHSYPVPEDISKQRQIINEVSSRLADIEATLDAGTRHRNKALASVGDNVEKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPISATAQIQEALQRATFDSNSLVGIIFHSMDALESPPTYFRTNNFTSPYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIACEKKLSAQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFCVPFHIFGASAYKCRDNSCRDAHTIGLVKYRETYPFGVDPRWRGSRSELAFLNSLKMKMSILLGVVHMNLGILLSYFNACFFGNSIDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPFEKLGENQLFWGQGVLQVVLLLSALIAVPWMLFPKPFILKKLYDERFFQGQTYGKLNTTEMDPEVEPGSAGQHQEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYENLIIRIIGLVVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYYGDGYKFKPFSFASLIDDEN*	816

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy13g0389	815	PANTHER	VACUOLAR PROTON ATPASES	3	814	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Ahy13g0389	815	Pfam	V-type ATPase 116kDa subunit family	33	807	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Ahy13g0389	815	Coils	Coil	95	122	-	-
	Ahy13g0389	815	PIRSF	ATP6V0A1	5	815	IPR026028	GO:0000220\|GO:0046961
	Ahy13g0389	815	PANTHER	VACUOLAR PROTON ATPASE A1	3	814	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy13g0389	Ahy-Chr13	3947377	3955797	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy13g0389	1	808	Primary Pumps ATPases(2)	AT2G28520	75.862	0.0	1260