Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0381 ATGGAGGGAAGTGACACTAACAACAACACCTACTCTAACTCTACTTCTACTTCTTCTGGTTATCCTCCTCCTCCTGCGGCGACGGTGGCGGTTGTTATGAGCCCTTGTGCAGCATGCAAGATCTTGAGGCGAAGATGCACCGAGAAATGCATGCTTGCGCCATATTTCCCTCCCACTGAGCCTACCAAGTTCACCATTGCTCATAGGGTCTTTGGCGCTAGCAACATCATCAAGTTCTTGCAGGACCTTCCGGAATCTCAAAGAGCTGATGCAGTGAGTAGCATGGTGTATGAGGCAAGTGCAAGAATAAGGGACCCAGTTTATGGTAGTGCAGGTGCAATTTGCCACCTTCAGAAGCAAGTCAATGAACTTAGAGCACAATTGGCAAAAGCACAAGCTGAGGTTGCAACCATGCAATTTCAACAAGCCAACCTTGTTGCCCTAATTTACATGGAAATGGCACAACAAAAAAGCTCCCAACAACAAGAATTTGAATCATCACCTCAGCAATCATCAATGGAGGATTTCAGTGTTCCAAGTCCTCACTATCAACAAAGTAACATCAACTACTTTGAGGATACCCCTAGCCTCAATTCATTGTGGGAGCCGCTCTGGACGTGA 621 0.4654 MEGSDTNNNTYSNSTSTSSGYPPPPAATVAVVMSPCAACKILRRRCTEKCMLAPYFPPTEPTKFTIAHRVFGASNIIKFLQDLPESQRADAVSSMVYEASARIRDPVYGSAGAICHLQKQVNELRAQLAKAQAEVATMQFQQANLVALIYMEMAQQKSSQQQEFESSPQQSSMEDFSVPSPHYQQSNINYFEDTPSLNSLWEPLWT* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0381 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 16 203 - -
Ahy13g0381 206 MobiDBLite consensus disorder prediction 159 178 - -
Ahy13g0381 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 16 203 - -
Ahy13g0381 206 MobiDBLite consensus disorder prediction 1 22 - -
Ahy13g0381 206 Coils Coil 114 141 - -
Ahy13g0381 206 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
Ahy13g0381 206 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0381 Ahy-Chr13 3830683 3833398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0381 31 206 AS2 family AT1G07900 61.453 3.12e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy13g0381 LOB 1.40E-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0381 - - gmx:100819336 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0381 13 3830683 3833398 Ahy13g0381 13 3830683 3833398 ECH
Ahy18g0462 18 4082994 4085060 Ahy13g0381 13 3830683 3833398 ECH
Ahy18g0462 18 4082994 4085060 Ahy13g0381 13 3830683 3833398 PCT
Ahy8g1271 8 28272190 28273959 Ahy13g0381 13 3830683 3833398 PCT
Ahy13g0381 13 3830683 3833398 Ahy18g0462 18 4082994 4085060 PCT
Ahy13g0381 13 3830683 3833398 Ahy8g1271 8 28272190 28273959 PCT