Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0366 ATGTCTGAAGAACCCTTTTCTTCTGTTCTTCCTCCCAACACCACCATCACAAGCACCTTGGTTCATCTCCAAGACCCAACCTCAAACCCTAGTAGCAATAACTCAAAACCTAATTCAAATCAACCCACCAAGAAGAGGAGAAATCTTCCTGGAACACCAGATTTGACTAAATTGTCGTCGATTCTCAGATATCAACTTTATATGAAGTTAACTGCAGATTCAAATTTGAGTAGGGACCAGAACTTGCAGCTGCATAGGAGAGGACACAACCTTCCATGGAAGCTAAAGCAGAGAAACAAAGAAGAACAAGTGAGGAAGAAGGTGTACGTGTGCCCGGAGAAGTCTTGCGTGCACCATGACCCCTGTAGAGCACTGGGGGACCTCACAGGTATCAAGAAACACTACAGCAGGAAGCATGGCGAGAAGAAATGGAAGTGTGACAAGTGTTCCAAGAAATACGCCGTTCATTCCGATTGGAAGGCCCATGCCAAGATCTGCGGGACTCGGGAGTACAAGTGCGACTGTGGCACCATTTTCTCCCGGTACGTCTCTTATCAGCTTAAGTTTTTGGGAGGAGTGACTGTTGAATAA 591 0.4602 MSEEPFSSVLPPNTTITSTLVHLQDPTSNPSSNNSKPNSNQPTKKRRNLPGTPDLTKLSSILRYQLYMKLTADSNLSRDQNLQLHRRGHNLPWKLKQRNKEEQVRKKVYVCPEKSCVHHDPCRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVHSDWKAHAKICGTREYKCDCGTIFSRYVSYQLKFLGGVTVE* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0366 196 PANTHER BNAA06G38780D PROTEIN 20 185 - -
Ahy13g0366 196 SUPERFAMILY beta-beta-alpha zinc fingers 140 180 IPR036236 -
Ahy13g0366 196 Gene3D Classic Zinc Finger 101 188 - -
Ahy13g0366 196 MobiDBLite consensus disorder prediction 1 55 - -
Ahy13g0366 196 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0366 Ahy-Chr13 3640455 3641266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0366 18 185 IDZ Gene Family AT5G60470 62.286 1.25e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy13g0366 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0366 K25870 - ahf:112736159 396.741