Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0322 ATGAAGCTCAAGCTCAGAGTTGCTCTTGCTATCATCTTCGTCTTGCTCTCGATTGAGCACTCATTTTCTGATGAGCCTTCTGATACCTATGGCCTAAACAAGTGGAAATGTACATGTGCTTTCCAAGGGAACCAGAGCTACTCTATTGCAAATTGTTCTAAGTCATGTGATTGCCGTTCGGATGCTGAAGAGACTTCATCTATATGGACATGCTTATGTAATCCCAATGGATTCCCCCAAATGGGAGTGGCATCAGCAAATGGCCACAACCATAATTGCTTCAGTGCCTGCAACTGTACCTGGGGAACTAACAGCTTGCCACTAGGTTCAAAGAAACACATCTCCAGCAAGACTGTTGTAGTTATTCTACTAATATGTGTTGTCTGTACGACCATTGCATTTCTTACCTCAGTCCTATGCTATGTCTACCGAAGGGACAGATGTCCTATTCAATCACCAATATTTTCACCGGATAAGGAAACAAGTAGTGGTAGCACTGCCAACTTAATTAGTCACAGGACAGTGACTTCTTCAGTGGCAGAAACAAAATTTGCTATTGATTCTCCTGTTAGTAATATGACAGGATGCTTTCAGAAAGCCTCTTTCTTGTTTGGGATCCAGAGGGAAACTTTTCATGGAAATATTATTCAATTTTCCTTTGCCGAACTAGAAAATGCCACTGAAAACTTTCTAGGCTCCAACCTAATTGGACTAGGTGGAAGTAGTTATGTATACCGCGGTCGTCTGAAAGATGGTAGTATCGTGGCAGTTAAGCGACTAAAAGATCCAGGAGGGCCAGAAGCAGACTCTGCATTTTTCAAAGAGATTGAACTATTATCTAGACTTCATCATTGCCATTTGGTGCCTTTGCTTGGATACTGCTCAGAATTAAAAGGGAGACATTTTCAAAGGCTACTAGTATTCGAGTACATGTCTAATGGGAATTTGAGGGACTGGTTAGATGGAGTGTCTGCAAAAAATCTCGACTGGACCACACGCGTCACAATCGCAATTGGAGCCGCAAGGGGCTTGGAATATCTCCATGAAGCGGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATCAACAAACATTCTTCTGGATGAAAATTGGCAAGCAAAGATAACTGACCTTGGTATGGCTAAGAACGTGCGAGCGGATGATCACCCCAGCTGTTCGAATTCTCCAGCTAGAATGCAGGGAACATTTGGATATTTTGCACCCGAGTATGCTATTGTTGGGCGAGCCTCTCTTGAATCGGATGTTTTCAGTTTTGGGGTGGTTCTCCTTGAGCTTATCAGTGGTCGGCAACCAATCTATAAAACTACGGGCAAAGAAGAAAGCCTTGTTATTTGGGCTGCGCCCCGCTTACAGGATAGTAGGCGAGTAATATTGGAGTTGGTCGATCCACAACTGAAAAGAGACTTCCCGGAAGAAGAGGTACAGATTATGGCATACTTAGCAAAGGAATGTTTGTTGCTGGATCCGGAAACTCGTCCATCTATGAGTGAGGTTGTTCAAATTCTCTCAAGTATTTCGCCTGACAAATCGAGACGAAGAAGAAACATTCCAGCTAGCCTGTTCCTGGAACCAGTAGAAGCAGAAAGATCTCCAGTTCATAATTCATTGCAACAAGACACTGATCATAGATTCTGGGTTGGGAACAAAAACAAAGAAGCTAATGTAGATTCAGCTGAGCATACAGAGAATTTGACCCTCTTGACATCAAAATCCGAGAGTTGCCACGTGTCAGAAGAGGAAATAGTAGACCTAACTGAGCCGCGATACGAATCATTTTGCATGGCAAATGTCAATTTCTCATGA 1824 0.4298 MKLKLRVALAIIFVLLSIEHSFSDEPSDTYGLNKWKCTCAFQGNQSYSIANCSKSCDCRSDAEETSSIWTCLCNPNGFPQMGVASANGHNHNCFSACNCTWGTNSLPLGSKKHISSKTVVVILLICVVCTTIAFLTSVLCYVYRRDRCPIQSPIFSPDKETSSGSTANLISHRTVTSSVAETKFAIDSPVSNMTGCFQKASFLFGIQRETFHGNIIQFSFAELENATENFLGSNLIGLGGSSYVYRGRLKDGSIVAVKRLKDPGGPEADSAFFKEIELLSRLHHCHLVPLLGYCSELKGRHFQRLLVFEYMSNGNLRDWLDGVSAKNLDWTTRVTIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNVRADDHPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIYKTTGKEESLVIWAAPRLQDSRRVILELVDPQLKRDFPEEEVQIMAYLAKECLLLDPETRPSMSEVVQILSSISPDKSRRRRNIPASLFLEPVEAERSPVHNSLQQDTDHRFWVGNKNKEANVDSAEHTENLTLLTSKSESCHVSEEEIVDLTEPRYESFCMANVNFS* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0322 607 ProSiteProfiles Protein kinase domain profile. 230 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0322 607 SMART serkin_6 230 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0322 607 PANTHER OS01G0253100 PROTEIN 2 601 IPR045271 GO:0004714|GO:0006468
Ahy13g0322 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Ahy13g0322 607 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 601 - -
Ahy13g0322 607 Gene3D Transferase(Phosphotransferase) domain 1 311 526 - -
Ahy13g0322 607 SUPERFAMILY Protein kinase-like (PK-like) 211 509 IPR011009 -
Ahy13g0322 607 ProSitePatterns Protein kinases ATP-binding region signature. 236 258 IPR017441 GO:0005524
Ahy13g0322 607 Gene3D Phosphorylase Kinase; domain 1 205 310 - -
Ahy13g0322 607 CDD STKc_IRAK 236 512 - -
Ahy13g0322 607 Pfam Protein kinase domain 234 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0322 Ahy-Chr13 3256722 3263886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0322 1 604 Receptor kinase-like Gene Family AT2G28250 52.381 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Ahy13g0322 Pkinase 7.00E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0322 - - gmx:100817870 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0502 18 4627777 4631478 Ahy13g0322 13 3256722 3263886 PCT
Ahy8g1308 8 28923697 28927432 Ahy13g0322 13 3256722 3263886 PCT
Ahy13g0322 13 3256722 3263886 Ahy18g0502 18 4627777 4631478 PCT
Ahy13g0322 13 3256722 3263886 Ahy8g1308 8 28923697 28927432 PCT