Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0252 ATGGAGCCACCGGTTGTTAGATCGAGAGGGAGGCCGCGGAAGCGTAGAAGAAAAGAGGAAGAAATGGAAGCTCTGGAAGCAAAGAGGCAAGCCTTGGCAACCAGATCGATAGCGTTGGTTGGACGATTCGTGCTGAAGGAGTTCCCGAAAATCGGTGTTTTTCTCGGTAAAGTTGTGTACTACGAGTGTGGCTTGTATAGAGTTAGTTATGAGGACGGTGATTTCGAGGATTTGGATAGTGGTGAGGTTCGTGCTGTTCTACTAAATGACAGTGATTTTGATGATGATTTGACTAAGAGGAAGGGTAAATTGGAGCAATTAGTGTTGAAGAATAGTGTAAAGGTTCAGGCTAAGTCGGTGAAGGCTTCTGATGAGATGAATAAAGATGAATCCAAGGTTGATGGACCTGTTTCGGGAGAACTTAACGGTGAAAACGGTGAGGAACAAGCTGAAGGTGGCGATGATTTGTTGAGTGATGATTATTCTGATTCAGATGCTGAGGCAGTGCCTGCCGTGCCACCGCGGCCGCCTTTGTTGCAGTTGCCACCATCGTCAGGGACTATTGGTGTGCCGGAGCAGTGTGTTTCGCACCTGTTTGCTGTTTATGGTTTCTTGAGATCATTTAGCACTAGGTTGTTCCTGGCACCGTTTACTTTAGATGATTTTGTTGGTTGTCTTAATTGCCGAGTTGCTAACAGCTTGATTGATTCTATTCACGTCTCCCTATTGCGGGTATTGAGGCATCATCTTGAATCCGTTTCATCTGAAGGCTCAGAGCTTGCATCGAAATGCCTTAGTTGTTGTATTTGCAGGTGCAATGATTGGGGCTTGCTTGATGCATTGACTTGGCCTGTTTTTGTGATTCAGTATTTATTAGTTAATGGACACACAAAAGGACCTGAATGGAAAGGGTTTTATGATGAGGCTTTTGCTTGCGAGTATTATTTATTGCCTGTAAGTAGGAAGTTAATGATATTGCAAAAACTCTGCGATGATGTTTTGGATTCAGAGGAGCTAAAAGCTGAAATGAACATGCGGGAAGAATCAGAGGTTGGGGTGGATTATGACGCAGAAGATATCATTGCTGCAGAAAATGGGCCTGGAAAAGTCCTGCCAAGACATGCCAATACTGCTTGTGAGGATAAAGGAGCCATGAAGATAGTTTTGGCATCAAATTTTGTGAACCAACATGTTAACCCTAATAATTCCAATTCCAGAAATGCAGGAAACGTTGGTGATGGCGATGATAGAAATGGAGATGAATGTCGTCTTTGTGGTATGGATGGGACCTTGCTTTGTTGTGATGGGTGCCCCTCTGCTTATCACTCCAGGTGTATTGGTGTTTCGAAAATGCATATACCAGAAGGACCGTGGTATTGTCCAGAATGCAAGATTAACATGATTGGGCCAACAGTTGCAAAGGGAACATCACTTAGAGGTGCTGAAATATTTGGAATGGATTTGTACGGGCAGCTTTTCATGAGTTCTTGCGACCACTTATTGGTGCTCAATGTCAACAATGATGAATTCTGTCTTAAATATTACAACCAGAGTGACATTCCTAATGTTATCCAAGTGCTCTGCGGATCCTTGCAGCATAGACCAATATACTATGATATTTGCATGGCAGTTATGCAATATTGGAATATTTCTGAAAGAGTCTTGCCTCTTCCTCCTCCGTCAAGTGAAGATGGTCATAAGCCTGTTAGTTTGGTGAATGGAGAGTACTCTCACACTTTGAGCTTGATTTATAGTGGCAATGTAGTCCCTTCACGTGATATCTCAACAACTAACACTGTAAATCAATGTCCTGAAAGCAGCGGTAATGAGCTCCCTACCACAAATATGAAGCTTCCTCAGGAAACTAGGATGGTGTCACTAATGTCAAATGATTCTGGGTCTGTTTCTGTTAGTAATCAGTCTGAGTTGAACTATCGAAGTTCTGTCAATGGGTTAACTGTGGTGGCTTCTTCACGCTCTTTGATAAACAGCCAATATAGTAATAATGCCCATTCAAATGATATTGTACTGCCAGTGAACTTCTCTCTGGAAACCAAAGAGAGCACCCGAGTTGGTTTTGGAAAGGTGGAACACAAAACAACTAACAATGTTGGGTACATGGGTTTGTCCTATAAACCTTTGTCATACATTAATAACTATATGCATGGTGATTTTGCTGCATCAGCAGCTGCCAAATTGGCCGTTCTATCCTCTGAGGAATCTAGGTCAGAGGGTCATGTTTCCGACAGTCAGAAGAAAACGATAGCTCAGATCACTTATTTGCAAGCAAAAGCATTCTCACAAATAGCTTCACGTTTCTTTTGGCCAGCTACTGAAAAGAAGCTAATGGAGGTGCCAAGAGAGAGGTGTGGCTGGTGCTTTTCTTGTAAAGCCCCTGTTTCAAGCAAGAGAGGATGCATGTTAAATCATGCCCTTATAAATGCCACAAAAAGTGCGCTGAAAGTTCTTGCTGGTTTTCCTCCACTAAGGAGTGGAGAGGGAATCCTTCCTAGTATTGCAACATACATTTTATACATGGAGGAATGTTTACATGGTTTAATAGTTGGGCCCTTTCTAAGTCCAAGTTATAGAAAGCAATGGCGAATGCGGGTTGAACAGGCCACAACATTTAGCTCTATCAAACCACTCTTGCTTGATCTTGAGGAAAATATTCGCATGATTACTTTCTGCGGGGATTGGCATAAGTTGATGGATGATTGGTTGGTTGAGTTTTCTATGATTCAAAGGTCTGCATCTGCTCTTGGAACAACACAGAAACGTGCACCAAGTGGGAGGCGTTACAAAAAACGCTCAGCTACTGAAGAACCTACAGCTGATGGTTGCCATGAAAGCCTTGAGTGGTGGCGGGGTGGGAAATTCACCAAGTTTATATTCCAAAAAGCTGTTTTGCCAAGATCCCTGGTCAGGAAAGCTGCACGCCAAGGTGGTTCGAGGAAAATCTCTGGCATTTTCTATGCTGATGGATCTGAAATCCCTAAAAGGACCAGACAGTTTGTGTGGAGAGTTGCAGTACAGATGTGTAAGACTGCATCACAGCTGGCACTTCAGGTCAGATATCTAGATTTTTATATCAGATGGAGTGATCTAATTCGTCCAGAGCAGAATATTCAGGATGGTAAAGGTCAAGAAACTGACGCTTCTGCTTTTAGAAATGCAAATATTTGTGATAAAAAGCTTGTAGAGGGGAAAACTTGTTACGGAGTAGCATTTGGGAGCCAAAAGCATCTTTCTACTCGTTTAATGAAAAATGTTATTGAAATTGAGCAAGGTATAGAAGGAAAGGAAAAGTATTGGTTTTCCGAAACACGCATTCCTTTATATTTGGTGAAAGAGTATGAAGAAAGCAATGGAAACGGACCATCTGTTGGTGAGCACTTGAATACTGCATCACAACAATTGCTCAGTCGGTGGTTGAAAGCATCCCGCAAGGATATTTTTTTCTACCTTACCTGCAAGAGAGACAATTTGGACATGTTCTTGTGTTCTGTATGTCATACTGGTGTTCCATTAAGGAATGCACTCAAGTGCAATACTTGTCAAGGTTTTTGTCACGAGGGCTGTTCCCTAAGGTCAACAATCTTCACAAATAAGAAAGTTGAGTACTTGACCACATGCAACCAATGTTATCATGCCAAGTTCCTTGCTCAAAAGGAGACCAGTAATGAATCTCCAACCAGCCCCTTACTCTTACAAGGACGTGAAAACAACTCTCTTACTATCCTAAAGGGATTAAAGTCTAAATATTCTGATCTAGCACAGAAGTCTGCCAAGGCAAAGGATAGCCGTCCAGAAGCAAAACAAGCAAAACAAGTTGCTTCAATGACAGTTTTGAAGGAAGCAAAGACTTCCACCAAGTCAAAGGATAGTCATCCAGACAGAAAACAACTTGCTTCTGGTTCCAGCTCGGCAACTGCAACCCATCGTAGGAATTGTTCTTGGGGTGTGATATGGAAGAAGAAAAATATTGATGATACAGGCGATGAATTTAGGCTCAAAAACATACTTTTAAAGGGAGCTTCAGGAATTCTTCAAGAGCCACCAATTTGTCACTTGTGCCGTAAGAAATACTGTTCCGATCTGATGTACATTCACTGTGAGTCATGCTCAAATTGGTATCATGCTGAAGCTGTTGAACTCGATGAGTCCAAAATTTTTGATGTACTGGGCTTCAAATGTTGCAAGTGTCGCAGGATAAAATCACCTGATTGTCCTTATGCTGATACTAAGCGCAAGACACAAGAGGGTAAGAGGACAAGGACTTCAAAGAAAGAGTATTCTGGTCCAGATTCTGATTCTGGAACATTTTCTGATATGAAAGAGTGTGAGCCTGCTACCCCTGTCTTCCCAGTAGAGGATGATCCTCTACTTTTCTCTCTTTCAAGCGTGGAGCTGGTTACAGAACCTAAGTTAGAGGATGCTGAGTGGAGTACTCTCTCTGGCCCTGGGCCTCGGAAACTACCAGTGAGACGGCATGTTAAACGTGAGGGGGACTGCGATGGATTTTACGTAGAGAAACCGTTGTATGATGAAACTTTGGCACATAATGAAGCGGGTGATACGTACAAACCCGAGCCTTTAGACTATGACTCTGTCGTGCCAAATGATAGCAATCTGCTTAATGAAGCGGAAGGTTCACAGTATGAATTTGCGGACTTTGAACCTCATACCTACTTCTCTGTAACGGAACTGCTGCTTCCAGATGATAGTAGCCAGCTTGAGGGAGCTGATGCATCTGGTGAGTTGTCAGGATATTTGGGGAATTCTTGTACACAAGTTCCTGAAGAATGCGGTGTAACTTTAGATGACAAATCAGAACCTGCCCTATCATTTGAAGACGCTGTTTATAGTTGTTGGCAGTGCGGGCAAATGGAACCAGCCCCTGATCTGTGTTGTGAGATTTGTGGGATTTTTATTCACAGTCAATGCTCCCCTTGGGTTGAGTCACCATCAAGGCTTGGAAATTGGAGGTGTGGCAATTGCCGGGAATGGCAATAG 5016 0.4278 MEPPVVRSRGRPRKRRRKEEEMEALEAKRQALATRSIALVGRFVLKEFPKIGVFLGKVVYYECGLYRVSYEDGDFEDLDSGEVRAVLLNDSDFDDDLTKRKGKLEQLVLKNSVKVQAKSVKASDEMNKDESKVDGPVSGELNGENGEEQAEGGDDLLSDDYSDSDAEAVPAVPPRPPLLQLPPSSGTIGVPEQCVSHLFAVYGFLRSFSTRLFLAPFTLDDFVGCLNCRVANSLIDSIHVSLLRVLRHHLESVSSEGSELASKCLSCCICRCNDWGLLDALTWPVFVIQYLLVNGHTKGPEWKGFYDEAFACEYYLLPVSRKLMILQKLCDDVLDSEELKAEMNMREESEVGVDYDAEDIIAAENGPGKVLPRHANTACEDKGAMKIVLASNFVNQHVNPNNSNSRNAGNVGDGDDRNGDECRLCGMDGTLLCCDGCPSAYHSRCIGVSKMHIPEGPWYCPECKINMIGPTVAKGTSLRGAEIFGMDLYGQLFMSSCDHLLVLNVNNDEFCLKYYNQSDIPNVIQVLCGSLQHRPIYYDICMAVMQYWNISERVLPLPPPSSEDGHKPVSLVNGEYSHTLSLIYSGNVVPSRDISTTNTVNQCPESSGNELPTTNMKLPQETRMVSLMSNDSGSVSVSNQSELNYRSSVNGLTVVASSRSLINSQYSNNAHSNDIVLPVNFSLETKESTRVGFGKVEHKTTNNVGYMGLSYKPLSYINNYMHGDFAASAAAKLAVLSSEESRSEGHVSDSQKKTIAQITYLQAKAFSQIASRFFWPATEKKLMEVPRERCGWCFSCKAPVSSKRGCMLNHALINATKSALKVLAGFPPLRSGEGILPSIATYILYMEECLHGLIVGPFLSPSYRKQWRMRVEQATTFSSIKPLLLDLEENIRMITFCGDWHKLMDDWLVEFSMIQRSASALGTTQKRAPSGRRYKKRSATEEPTADGCHESLEWWRGGKFTKFIFQKAVLPRSLVRKAARQGGSRKISGIFYADGSEIPKRTRQFVWRVAVQMCKTASQLALQVRYLDFYIRWSDLIRPEQNIQDGKGQETDASAFRNANICDKKLVEGKTCYGVAFGSQKHLSTRLMKNVIEIEQGIEGKEKYWFSETRIPLYLVKEYEESNGNGPSVGEHLNTASQQLLSRWLKASRKDIFFYLTCKRDNLDMFLCSVCHTGVPLRNALKCNTCQGFCHEGCSLRSTIFTNKKVEYLTTCNQCYHAKFLAQKETSNESPTSPLLLQGRENNSLTILKGLKSKYSDLAQKSAKAKDSRPEAKQAKQVASMTVLKEAKTSTKSKDSHPDRKQLASGSSSATATHRRNCSWGVIWKKKNIDDTGDEFRLKNILLKGASGILQEPPICHLCRKKYCSDLMYIHCESCSNWYHAEAVELDESKIFDVLGFKCCKCRRIKSPDCPYADTKRKTQEGKRTRTSKKEYSGPDSDSGTFSDMKECEPATPVFPVEDDPLLFSLSSVELVTEPKLEDAEWSTLSGPGPRKLPVRRHVKREGDCDGFYVEKPLYDETLAHNEAGDTYKPEPLDYDSVVPNDSNLLNEAEGSQYEFADFEPHTYFSVTELLLPDDSSQLEGADASGELSGYLGNSCTQVPEECGVTLDDKSEPALSFEDAVYSCWQCGQMEPAPDLCCEICGIFIHSQCSPWVESPSRLGNWRCGNCREWQ* 1672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0252 1671 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1344 1421 IPR013083 -
Ahy13g0252 1671 MobiDBLite consensus disorder prediction 1262 1310 - -
Ahy13g0252 1671 MobiDBLite consensus disorder prediction 120 183 - -
Ahy13g0252 1671 PANTHER DNA-BINDING AND ZINC-FINGER PROTEIN 1286 1668 - -
Ahy13g0252 1671 PANTHER DNA-BINDING AND ZINC-FINGER PROTEIN 1 1281 - -
Ahy13g0252 1671 CDD PHD2_CHD_II 422 463 - -
Ahy13g0252 1671 CDD PHD_SF 1623 1667 - -
Ahy13g0252 1671 ProSiteProfiles DDT domain profile. 192 252 IPR018501 -
Ahy13g0252 1671 PANTHER PHD FINGER FAMILY PROTEIN 1286 1668 - -
Ahy13g0252 1671 PANTHER PHD FINGER FAMILY PROTEIN 1 1281 - -
Ahy13g0252 1671 ProSitePatterns Zinc finger PHD-type signature. 422 463 IPR019786 -
Ahy13g0252 1671 SUPERFAMILY FYVE/PHD zinc finger 1352 1408 IPR011011 -
Ahy13g0252 1671 Pfam PHD-finger 422 464 IPR019787 -
Ahy13g0252 1671 MobiDBLite consensus disorder prediction 1 22 - -
Ahy13g0252 1671 CDD PHD_SF 1355 1402 - -
Ahy13g0252 1671 MobiDBLite consensus disorder prediction 121 135 - -
Ahy13g0252 1671 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 312 344 IPR028942 -
Ahy13g0252 1671 ProSiteProfiles Zinc finger PHD-type profile. 419 466 IPR019787 -
Ahy13g0252 1671 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 413 468 IPR013083 -
Ahy13g0252 1671 SMART PHD_3 1623 1668 IPR001965 -
Ahy13g0252 1671 SMART PHD_3 1167 1216 IPR001965 -
Ahy13g0252 1671 SMART PHD_3 421 464 IPR001965 -
Ahy13g0252 1671 SMART PHD_3 1355 1403 IPR001965 -
Ahy13g0252 1671 Coils Coil 15 35 - -
Ahy13g0252 1671 SMART testlast3 192 252 IPR018501 -
Ahy13g0252 1671 MobiDBLite consensus disorder prediction 922 942 - -
Ahy13g0252 1671 Pfam DDT domain 193 248 IPR018501 -
Ahy13g0252 1671 MobiDBLite consensus disorder prediction 1413 1443 - -
Ahy13g0252 1671 MobiDBLite consensus disorder prediction 1413 1433 - -
Ahy13g0252 1671 MobiDBLite consensus disorder prediction 147 162 - -
Ahy13g0252 1671 SUPERFAMILY FYVE/PHD zinc finger 412 467 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0252 Ahy-Chr13 2596242 2605226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0252 27 1671 PHD Transcription Factor Family AT5G35210 41.117 0.0 1097
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Ahy13g0252 DDT 3.30E-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0252 - - ahf:112736410 3283.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0252 13 2596242 2605226 Ahy13g0252 13 2596242 2605226 ECH