Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0247 ATGGAGTTCTGGGGTGTTGAGGTTAAGCCAGGGGATTGCGTTAAAATAGAGGAGTTGGAAGTAGCTAATGACTACATCCACATCTCTCAGGTTGCGCTGGGAGAGGCCTCAAAGAATGAGAAATCTAAGGAGCCTGTGGTTGTCTACCTCAAAGTTGGAGTGCAGAAGCTTGTTTTGGGAACTTTGAACAGGGAGGAAATCCCCCAAATACCCTTGGATTTGGTTCTCGACCAAGAGGCTGAGCTTTCCCACACTTGCAAGAGTGCCAGTGTCTATTTCTGTGGATATAAGGCTGATCGTGATGAGGGCGTTCCTGGTGATTTTGGTTCTGATGACTATTCAGAGAGTGATGAGGAAGAGGCTGCATTGAATCTCAAAGATAATGGAAAAGTTGAAACCAAGTCTGAAAAGGTAAAGATTGCTGAACCAAAAAAGGATGTGAGTGGTGCCCCATCAAAGAAAGTCAATGTTGCTGTTCCAAAGAAAGATGAAGAGGACGAGGACTCTGATGACGACGATGATGACGTTGACGATGAGTCTGATGATGAGGATGAATCTGGAAGTGAGATGGATGCTGATAGTGATGAGGACGGGAGTGATGAAGATGAAGAGACACCTGTGAAGAAGGTCGACCAGGGCAAGAAGAGACCAAATGTGTCTGCAACAAAAACTCCAGTTCCTGCTGCTAAGAAAGCTAAGAATGTAACTCCTGAAAAGTCTGGTGGCAAGAAAATTGCACATGCACCAACTCCTCACCCCGTGAAGAAAGGTGGAAATCCGAACAGCGCAGGGAAGTTCCAGTCACCCAAAACTGGTTCACAGCAGCAGAAAAAGGGTGGAAAGAAGGGTGGTCGTTGA 858 0.4627 MEFWGVEVKPGDCVKIEELEVANDYIHISQVALGEASKNEKSKEPVVVYLKVGVQKLVLGTLNREEIPQIPLDLVLDQEAELSHTCKSASVYFCGYKADRDEGVPGDFGSDDYSESDEEEAALNLKDNGKVETKSEKVKIAEPKKDVSGAPSKKVNVAVPKKDEEDEDSDDDDDDVDDESDDEDESGSEMDADSDEDGSDEDEETPVKKVDQGKKRPNVSATKTPVPAAKKAKNVTPEKSGGKKIAHAPTPHPVKKGGNPNSAGKFQSPKTGSQQQKKGGKKGGR* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0247 285 MobiDBLite consensus disorder prediction 119 149 - -
Ahy13g0247 285 MobiDBLite consensus disorder prediction 164 202 - -
Ahy13g0247 285 MobiDBLite consensus disorder prediction 105 285 - -
Ahy13g0247 285 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 1 279 - -
Ahy13g0247 285 MobiDBLite consensus disorder prediction 261 278 - -
Ahy13g0247 285 Gene3D Nucleoplasmin core domain 1 104 - -
Ahy13g0247 285 Pfam Nucleoplasmin-like domain 3 96 IPR041232 -
Ahy13g0247 285 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0247 Ahy-Chr13 2514343 2516415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0247 1 108 C2H2 Transcription Factor Family AT5G03740 45.370 6.54e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0247 - - gmx:547649 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0247 13 2514343 2516415 Ahy13g0247 13 2514343 2516415 ECH
Ahy18g0574 18 5623343 5625881 Ahy13g0247 13 2514343 2516415 PCT
Ahy8g1382 8 29967546 29970179 Ahy13g0247 13 2514343 2516415 PCT
Ahy13g0247 13 2514343 2516415 Ahy18g0574 18 5623343 5625881 PCT
Ahy13g0247 13 2514343 2516415 Ahy8g1382 8 29967546 29970179 PCT