Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0238 ATGAATAACAGAGACAGTGAAACTTCAAACCCTATCGATGGCGGAACAAAGAAGCCCAAGGTGGTTGTTATTACGGGCCCCACCGCCTCCGGCAAGTCCAAGCTCGCCGTCGATCTGGCCTCACACTTTCCCATTGAAGTCATCAACGCCGACTCCATGCAAGTCTACTGTGGTCTCGACGTCCTCACCAACAAACTCCCTCTCTCCCAACACAAAGGGGTGCCGCACCATCTCTTAGGTACCGTAAACCCAAACGTTGAATTTACAGCTAAAGTGTTTAGGGATTCTGCTATTCCGATCATAGATGAAATACTAGCTCGCAATCACTTGCCTGTTATAGTTGGGGGTACAAATTACTATATCCAGGCTCTTGTGAGTCCATTTCTCCTAGACGATTTGGCAGATTATATGAACGAAGGCTGTTATGGTGATCCATCTGGTGCCACACGGTCTGATATGAGTTTCCCCGCCGATAATGACAATTCAAGTAATGGTTATGACCTGCTTAAAGAGATCGATCCAGTTGCTGCAAATAGAATCCATCCAAATAACCATAGAAAGATCAATCAATATATTAATTTGTATTCACGTACTGGTGTTGTTCCTAGCAAAGTATTCCAAGGAAAAGCAGCAGAGAAGTGGGGTCAAGTTGATAACTTAAAATATGATTGCTGTTTTATATGTGTGGATGCATCTCTCCCTGTGCTGGACAAATATGTTGAGCAGAGGGTAGACTGTATGATGGATGCTGGATTACTCAATGAAGTCTATGATGTTTACAACGTGAATGCAGATTATACTAGAGGATTGCGGCAAGCCATTGGTGTCCGAGAATTTGAGCCACTTCTTAGAAGTTGCCTTGTTGAAGACATCTATAAAAGAGAGAAGGAACTGTTAAACGGTTCCAGAATAGAAAAGGGTTTGAAATTGTTTGATGGTAACCTGATGGGGTGGTTGAAATCTTCCTCTGATACTAATACCATAATTCTTTTAGAAGAAGCAATAGAAAAAGTGAAGGTTAATACCCGGAGACTTGTTCGACGACAGAAGAGGATGCTCAATAGACTGCAAACACTATTTGGTTGGAACATACATTTTGTTGATTCCACAGAGTCAATATCAAGCAAATCAGAGGATGTATGGACTGACCAAGTGGTTGAGTCAGCTACAAAGGTAGTTAGTTCCTTCTTGTGTGAGAATGGAAGCTTGTCATCTACTTGTGGCATGTCAAATGACACCAACGTGAAAATTAATCAAAGGGACCTCTGGACTCGATACATATGCAAGGCCTGTGGAGACAGGGTGCTAAGAGGATTACATGAATGGGAACAACACAAAAAGGGTCGTGGCCACAGGAAACGTATTTCTAGTCTCAAGAGCAAGGCACAAAGTCTTGGTACCTTAGACAAAACGTTTGATTACTATGAATGCAAATAG 1437 0.4238 MNNRDSETSNPIDGGTKKPKVVVITGPTASGKSKLAVDLASHFPIEVINADSMQVYCGLDVLTNKLPLSQHKGVPHHLLGTVNPNVEFTAKVFRDSAIPIIDEILARNHLPVIVGGTNYYIQALVSPFLLDDLADYMNEGCYGDPSGATRSDMSFPADNDNSSNGYDLLKEIDPVAANRIHPNNHRKINQYINLYSRTGVVPSKVFQGKAAEKWGQVDNLKYDCCFICVDASLPVLDKYVEQRVDCMMDAGLLNEVYDVYNVNADYTRGLRQAIGVREFEPLLRSCLVEDIYKREKELLNGSRIEKGLKLFDGNLMGWLKSSSDTNTIILLEEAIEKVKVNTRRLVRRQKRMLNRLQTLFGWNIHFVDSTESISSKSEDVWTDQVVESATKVVSSFLCENGSLSSTCGMSNDTNVKINQRDLWTRYICKACGDRVLRGLHEWEQHKKGRGHRKRISSLKSKAQSLGTLDKTFDYYECK* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0238 478 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 400 - -
Ahy13g0238 478 Gene3D - 19 422 IPR027417 -
Ahy13g0238 478 MobiDBLite consensus disorder prediction 1 20 - -
Ahy13g0238 478 Pfam IPP transferase 54 351 - -
Ahy13g0238 478 CDD NK 21 73 - -
Ahy13g0238 478 Hamap tRNA dimethylallyltransferase [miaA]. 21 394 IPR018022 GO:0008033
Ahy13g0238 478 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 17 400 IPR039657 -
Ahy13g0238 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 251 IPR027417 -
Ahy13g0238 478 Gene3D - 150 209 - -
Ahy13g0238 478 TIGRFAM miaA: tRNA dimethylallyltransferase 21 287 IPR018022 GO:0008033
Ahy13g0238 478 Gene3D Classic Zinc Finger 423 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0238 Ahy-Chr13 2447579 2451147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0238 10 460 C2H2 Transcription Factor Family AT2G27760 55.991 1.70e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0238 K00791 - gmx:100792690 727.628