Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0233 ATGAACGGCGATGCCCGGAGACGCGACCGGAGGGACAACCCCAAGAGGTCGAAGAAGCAGAAGCTGATTTGCAGTGCAGAGGAAGAACTTGAGGCCAGATTAGGGTTCGATCTCTTCTCTGAGGGCGAAAAGCGTCTTGGATGGTTGCTCAATTTTGCATCTTCTTCTTGTGAGGATGAAGAGACCCACAAAGTCTACAGTTGCGTCGATCTTTACTTTGTTACACAGGATGGATCTTCCTTCAAGACTAAATACAGATTTCGTCCTTATTTCTACGCAGCTACAAAGAATAAAATGGAGATGGATGTTGAAGCATACCTGAGGCGCCGTTATGAAACTCAGATTGCAGACATTGAAATTATAGAGAAAGAAGACCTGGATCTTAAAAATCATTTGTCTGGCTTAAGAAAACCTTATCTAAAGCTATCATTTGATACCGTGCAACAATTGATGACTGTAAAGAGTGACCTGATGCATGTTGTTGAAAGAAATCAGGCAAAGTCTGATGCTGCAGAAGCCTATGAGTCCATATTGACTGAAAGAAGAGAACAAAAACCACAGGACTTTATAGATTGCATAATTGATCTCCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGCTCTGGCCAGTGGTATGATGTTTGCGTGTCCAGTACTGGGGTTACACTTGAGAAGAGAACAGATCTTCTGCAGCGTGCCGAAGTTCGTGTTTGTGCATTTGACATTGAGACCACAAAACTTCCACTCAAATTTCCTGATGCTGACTATGATTTGATTATGATGATTTCATACATGGTAGATGGACAAGGGTATTTAATCACAAATAGAGAGTGTGTTGGTGATGACATAGAGGATTTAGAGTACACTCCTAAACCAGAGTTTGAAGGCTGTTTTAAGGTTACAAATGTTCAAAATGAGATTGAACTTCTTAGATTATGGTTTTCTCACATGCAAGAGGTGAAACCTGGTATTTATGTGACGTATAATGGTGATTTTTTTGATTGGCCATTCCTTGAGAAAAGGGCAGAACATCATGGGTTCAAAATGAGTGAGGAATTGGGGTTTCAGTGTGACAAGAATCAAGGGGAATGTCGTGCTAAATATGCTTGTCATTTAGATTGTTTTGCTTGGGTTAAACGGGACAGTTATCTCCCTCAAGGAAGCCAAGGCCTAAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCCTTGGAGGTGAACCCTGAGGATATGGTTTGCTTTGCAAAGGAAAAGCCTCAGACAATGGCTTCCTATTCCGTTTCTGATGCAGTGGCAACTTATTACTTATATACAACTTATGTTCATCCCTTTATTTTCTCCCTTGCTACTATTATACCCATGTCACCAGATGAAGTCTTGCGCAAAGGCAGTGGGACCCTCTGTGAAATGTTGCTCATGGTTCAGGCATACAAAGCGAATGTTATATCTCCTAACAAACACCAATCCGACCCAGAGAAGTTTTATAACAATCATCTTCTTGAGAGTGAGACATACATAGGTGGCCATGTAGAATGCCTAGAAAGTGGTGTTTTCAGGTCTGATATTCCAACTAGTTTTACACTAGAGTCATCTGCCTATGAGCAATTGATCAACAATCTTGATAGAGATCTACAGTATGCTATAAGAGTAGAGGGTAAAATGGATTTGGAATCTGTCTCTAATTATGATGAAGTAAAGAATGCCATCATGGAAAAGCTTTCAAAATTACGAGATGTTCCAATACGTGAAGAATGCCCCCTCATTTATCATCTAGATGTAGCTGCTATGTATCCAAACATAATTTTGACAAATCGACTTCAGCCACCGTCAATTGTTTCAGATGAGGTTTGCACTGCATGTGATTTCAACCGTCCTGGAAAGACATGTCTACGCAAACTTGAGTGGGTTTGGCGTGGAGAAACATTCATGGCAAAGAAAAGTGACTATTATCATATAAAGAAGCAGATTGAGTCCGATTTTGTTGATGGTGCTAACGTGAGGTTATCAAAATCTTTTCTTGACCTGCCCAAGGCAGAGCAACAATTAAGGCTGAAAGACCGTTTAAAGAAATACTGCCAGAAGGCATACAAGCGTGTTCTTAACAAACCAGTTACAGAACTCCGTGAAGCAGGAATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGAGATAGAAGATATGAATATAAAGGCCTTAATAAGGTTTGGAAGGGAAAACTTTCAGAAGCCAAGGGCAGTGGAAATCCTATGAAGATCCAGGAAGCACAAGACATGGTTGTGCTTTATGATTCATTGCAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATATGTTATGCGCAAGGGTGCTAGATGGTACTCCATGGAAATGGCTGGAGTAGTCACATATACAGGAGCAAAAATAATTCAGAATGCCCGCTTGCTGGTAGAAAAAATAGGGAAACCACTTGAACTAGATACTGATGGTATCTGGTGTGCACTTCCTGGGTCTTTTCCAGAAAATTTTACTTTTAAAACAAAAGATTCGAAAAGGAAGTTGACAATCTCATACCCTTGTGTAATGCTAAATGTTGATGTGGCAATCAATAATACAAATGATCAGTACCAGACACTCACAGATCCAATAAGGAAAACATATACTACCCGTAGCGAATGCTCTATAGAATTTGAGGTGGATGGACCATACAAGGCAATGATTCTTCCTGCTTCCAAAGAAGAAGGAATTTTAATTAAAAAACGATATGCTGTTTTTAATGATGATGGAACCCTTGCAGAGCTTAAAGGTTTTGAGATCAAGCGAAGAGGTGAACTGAAACTAATAAAAGTTTTCCAGGCTGAGCTATTTGACAAGTTTCTCCATGGCTCAACCTTAGATGAATGCTATTCAGCTGTTGCTGCTGTGGCAAATCGCTGGCTTGATCTTCTTGATAACCAAGGGAAGGATATTACAGACAGTGAGTTGCTTGATTACATCTCAGAATCAAGTACCATGAGCAAGTCATTAGCTGATTACGGTGAGCAAAAATCTTGTGCTGTCACCACTGCCAAACGTCTTGCCGACTTTCTTGGTGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAGTAGCAAGTGAACCTAAGGGAACACCTGTAAGCGAGCGTGCTATTCCTGTTGCAATATTTGAAACAAAAGCTGAAGTAATGAAGTACTATGTTCGAAGATGGTGCAAGGCCTCATCAGATGTTGGCATTCGGTCCATAGTTGACTGGTCCTACTACAAGCAGCGGCTTTCTTCAGCAATTCAAAAAATTGTCACAATTCCCGCTGCCATGCAAAAGATTGCAAATCCTGTTCCTCGGGTAGCTCATCCGGATTGGTTGCATAAGAAAGTTCGTGAAAAAGAGGACAAGTTTCGTCAACGAAAATTAGTTGATGTCTTTAACTCATTTAAAAGGGATGATCGCTCAAAAAGGAATAGTGATTCTAATGGTGTCAGCCTTATGGCTGATGAAGAGACTGTGATTGACTTGGAGGATTTTGGAAACAAGGCCAGGAATTTGCCAATTGGTCCTAGACCAATTATACGGCATTATAAAGCTAATAATGAAGGGAATTCAATTAAGCTCAGTGGTCATGGAAATTCTGAGCAACAACATATTGATAATAGCAGCAAGGACGAGTCACTTTCACTTTTTCAACAAAAGGAAATATCATCTGAAATTGTAGACAGAAATGTTGATTATCAAGGATGGCTTGAAATAAAGAAGAGAAAGTGGAAAAGTATCCTGGAAAAGAGAAAAAAGCGAAGATTGGAGAATTCAAAGAAAGCTGATAGGATGAATGATGTTCCTGAACAAATGAATGGTACAACTGGTAGAACAAATGTCAGTTCATATTTTAGAACGAATGAAGTAGCCCTGAAGCAGTACCATTGGCAGATAATACAACTACTTCAGAGCTCACAGATTGGCCAATTTTTTGCCTGGGTAGTTGTTGATGGGATTATGCTTAAGATTCCTGTTTCGGTTCCTAGAGTCTTTTACCTCAACTCAAGATCACCAGTTACTGAAGAATTTCTTGGCAAAAGCGTCAAGAAGACACTTCCTCATGGAAAGCAAAGTTATAATCTGTATGAGGTTTCAATTGACGAAGTTCAATTTAAGGAAGCAAGCAAAAAACTTGCAGCTCTTCTAGCAGATCCTGATGTTGAGGGAATATATGAAACTAAGGTGCCACTGGAGTTTAATGCTATAGTCCAGCTTGGTTGTGTATGTAAGGTGGACAAAAGTGCCAAACAAAGAAGTCTACAAGACTCATGGAATTTGAGTGAATTGCACATGAAGACCACAACCGAATGTTCTTATCTCGAACAATTGATATCCTTTTTTTACTTGTATCATAGTATCTCTGAGGGACGGGCTATATACGTTGGATATTTTCCAGCATCAAAAGCAATAACAGTCGTGGTAGTTAATCCATATCAAAACAAGGATTTATCACTGGCTTATCTTGAAAGACAGTTTCACGATGCATGCCAAGCTTTGTCTATTCAGCCACCTCCCCGGAATAGCATTAGTTTTAAGGTGGACTATGTTTCACATGTCAAGGATGCTGAAACTTTGATGCAAAGAGCAATAAATGATCGCAGGAATGAATATCATGGACCTATGGTTGCTATCATTGAATGCCCAAATGTTCAACTTTTGAAATTGGGTATTCGATCTCTAGATGATTTTCCATGCCTGAGTATTCCTTGTAATGCCCGTGATAGTCAATATCAGATTCTTGGATGGCAACAAGTTGCTGGAAAAATTGGAATGCAACGTTGTGCTGCATCAGGCCAATGGCTAAATGAGAGAATTGCTCTCTCAAGATATGCCCATGTACCACTTGGGAATTTTGAACTTGACTGGCTTATATTTACAGCAGATACCTTCTTCTCAAGAGCTTTGCGTGATAGTCAACAGGTACTTTGGATATCGGATGGCGGTCTTCCTGATTTAGGTGGCATTAATGATGAAGAGACCTGTTTTCTTGACGAGGTCCACCAACCTGTTCTTACATATCCTGGAGCTTACAGAAAAGTTACTGTTGAGTTAAAGATACACCACCTAGCTGTGGATGCCCTTTTAAAAAGCAACCAAGTCAATGAAATGGAAGGAGGCGCTTTATTAGGATTCGATAATGAATTTAATTCTGGAGCTAATCCCACTATTGATCAGAGTGGCTTTGATGAGGCTGCCTCATGTACACATGCCTTTCGAATCCTGAAACAATTGATTCAGCGGTGCCTTGCAGATGCAGTTACATCTCAAAACACATATGCGGATGCAATGTTGCAACATCTGTATCGATGGCTTTGCAGCCCTCAGTCAAAACTTCACGATCCAGCTCTTCACCAGCTACTTCACAAGGTCATGCAAAAAGTGTTTGCAATGTTGTTGGCAGAGTTCCGCAAGTTGGGTGCAACAATTGTATTTGCAAACTTCTCAAAGATTATTATCGACACAGGGAAATATGATCTTGCTGCAGCCAAAGCTTACTGTGACAGTTTGTTAAGAACTATACAGTCTAGAGACTTATTTGAATGGATTGAGTTGGAACCACTTCAGTTTTGGCGGTCATTGCTATTCATGGATCAGTATAACTATGGCGGAATACCAGCAAAATCAGATGAATCTCAAGTTGACATTATATCAAGCTGGAATATTGCTGAGTACTTGCCAAAGAAAATCCAGGATCATTTCATTGTCATTGTTTCTCAATTCTTGTATATTCCTTGGAGCTATGCACAAAAGCAAGCAGGAATCAGGGAATCAATGCTGAATGGTGATTCCTGCACCCCATCGATTAACATTGGAGCTGCAGAGGCTTTGGAATCAGAAATGATAGAATATATCAAAGAACAGATCAGCTCTTACTTCACAGACAATCTTTTGCGAATTGTTCGTGATATTGTTCTTCACATGAAAGGGGCAAGCAAATCAGAAGATGACCCAAGTACATCATCTGGCCTTCCTCAAATTGTGGGTGATCAACATAGAGGGGATGCATCCTTGGAATTTATCAAGCATGTCTGTGCTGTGTTGGCCCTCGACCAAAGTGTGCAGCATGATGTGTTGGTCATGAGAAAGAATTTGTTAAAATATGTTCGTGTTAGAGAGTTTGCTCCAGAAGCTGAGTTTCGTGATCCATGTCATTCCTTCACCCTATCCAATGTCATTTGCAGCTATTGTAATGACTGCAGAGACTTGGACTTGTGCCGTGACTCGGCTTTATTGAATCAGGAGTGGCGTTGTGCGGTGCCACAGTGTGGGCAGCCTTATGACCGCGAGGTGATGGAGAATGCGCTTCTTCAGATCGTACGACAAAGAGAGCGGCTTTACCACCTTCAAGATCTGGTGTGCCTCAGGTGCAACCAGGTCAAAGCTGCACATTTGTCTGAGCAGTGTGCTTGTGCTGGCTCATTTAGGTGCAAGGAAGACGTTACTGAATTTCGCTCAAAGATGCAGGTTTTCTTCAACATAGCTTTTCGTCAGAAATTCCAACTTCTCCAGGAATGTACCTCTTGGATTTTAGAACTTAGATTGTAA 6624 0.4052 MNGDARRRDRRDNPKRSKKQKLICSAEEELEARLGFDLFSEGEKRLGWLLNFASSSCEDEETHKVYSCVDLYFVTQDGSSFKTKYRFRPYFYAATKNKMEMDVEAYLRRRYETQIADIEIIEKEDLDLKNHLSGLRKPYLKLSFDTVQQLMTVKSDLMHVVERNQAKSDAAEAYESILTERREQKPQDFIDCIIDLREYDVPYHVRFAIDNDIRSGQWYDVCVSSTGVTLEKRTDLLQRAEVRVCAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLITNRECVGDDIEDLEYTPKPEFEGCFKVTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLEKRAEHHGFKMSEELGFQCDKNQGECRAKYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVCFAKEKPQTMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVISPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPTSFTLESSAYEQLINNLDRDLQYAIRVEGKMDLESVSNYDEVKNAIMEKLSKLRDVPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVSDEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYHIKKQIESDFVDGANVRLSKSFLDLPKAEQQLRLKDRLKKYCQKAYKRVLNKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKGSGNPMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDSKRKLTISYPCVMLNVDVAINNTNDQYQTLTDPIRKTYTTRSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLDECYSAVAAVANRWLDLLDNQGKDITDSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAIPVAIFETKAEVMKYYVRRWCKASSDVGIRSIVDWSYYKQRLSSAIQKIVTIPAAMQKIANPVPRVAHPDWLHKKVREKEDKFRQRKLVDVFNSFKRDDRSKRNSDSNGVSLMADEETVIDLEDFGNKARNLPIGPRPIIRHYKANNEGNSIKLSGHGNSEQQHIDNSSKDESLSLFQQKEISSEIVDRNVDYQGWLEIKKRKWKSILEKRKKRRLENSKKADRMNDVPEQMNGTTGRTNVSSYFRTNEVALKQYHWQIIQLLQSSQIGQFFAWVVVDGIMLKIPVSVPRVFYLNSRSPVTEEFLGKSVKKTLPHGKQSYNLYEVSIDEVQFKEASKKLAALLADPDVEGIYETKVPLEFNAIVQLGCVCKVDKSAKQRSLQDSWNLSELHMKTTTECSYLEQLISFFYLYHSISEGRAIYVGYFPASKAITVVVVNPYQNKDLSLAYLERQFHDACQALSIQPPPRNSISFKVDYVSHVKDAETLMQRAINDRRNEYHGPMVAIIECPNVQLLKLGIRSLDDFPCLSIPCNARDSQYQILGWQQVAGKIGMQRCAASGQWLNERIALSRYAHVPLGNFELDWLIFTADTFFSRALRDSQQVLWISDGGLPDLGGINDEETCFLDEVHQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGALLGFDNEFNSGANPTIDQSGFDEAASCTHAFRILKQLIQRCLADAVTSQNTYADAMLQHLYRWLCSPQSKLHDPALHQLLHKVMQKVFAMLLAEFRKLGATIVFANFSKIIIDTGKYDLAAAKAYCDSLLRTIQSRDLFEWIELEPLQFWRSLLFMDQYNYGGIPAKSDESQVDIISSWNIAEYLPKKIQDHFIVIVSQFLYIPWSYAQKQAGIRESMLNGDSCTPSINIGAAEALESEMIEYIKEQISSYFTDNLLRIVRDIVLHMKGASKSEDDPSTSSGLPQIVGDQHRGDASLEFIKHVCAVLALDQSVQHDVLVMRKNLLKYVRVREFAPEAEFRDPCHSFTLSNVICSYCNDCRDLDLCRDSALLNQEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCLRCNQVKAAHLSEQCACAGSFRCKEDVTEFRSKMQVFFNIAFRQKFQLLQECTSWILELRL* 2208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0233 2207 MobiDBLite consensus disorder prediction 1 20 - -
Ahy13g0233 2207 Pfam Domain of unknown function (DUF1744) 1531 1897 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Ahy13g0233 2207 MobiDBLite consensus disorder prediction 1215 1237 - -
Ahy13g0233 2207 MobiDBLite consensus disorder prediction 1280 1305 - -
Ahy13g0233 2207 Gene3D DNA Polymerase, chain B, domain 1 56 232 - -
Ahy13g0233 2207 Pfam DNA polymerase family B, exonuclease domain 75 401 IPR006133 -
Ahy13g0233 2207 Gene3D - 239 469 IPR036397 GO:0003676
Ahy13g0233 2207 CDD DNA_polB_epsilon_exo 241 444 - -
Ahy13g0233 2207 CDD POLBc_epsilon 504 1123 - -
Ahy13g0233 2207 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 34 2203 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Ahy13g0233 2207 Pfam DNA polymerase family B 762 1067 IPR006134 GO:0000166|GO:0003677
Ahy13g0233 2207 Gene3D Palm domain of DNA polymerase 752 938 IPR023211 -
Ahy13g0233 2207 SMART DUF1744_2 1513 1897 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Ahy13g0233 2207 Gene3D - 942 1126 IPR042087 -
Ahy13g0233 2207 SUPERFAMILY DNA/RNA polymerases 487 1115 IPR043502 -
Ahy13g0233 2207 SUPERFAMILY Ribonuclease H-like 65 468 IPR012337 -
Ahy13g0233 2207 SMART polmehr3 240 843 IPR006172 GO:0000166|GO:0003676|GO:0003887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0233 Ahy-Chr13 2405883 2427130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0233 5 2203 Core DNA Replication Machinery Family AT2G27120 68.103 0.0 3067
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0233 K02324 - gmx:100812003 3738.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0233 13 2405883 2427130 Ahy13g0233 13 2405883 2427130 ECH