Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0222 ATGTACCATCATCATCATCAAGGGAAGAACATCCATTCTTCAAGTTCAAGAATGGCAATGTCTTCTGAGAGGCACATGTTCCTTCAAGCTGCTGGAAATGGTTCCGGGGGTGACTCTGGGCTTGTGCTCTCCACAGATGCCAAGCCTAGACTGAAATGGACACCAGATCTTCATGCCAGGTTCATAGAAGCAGTTCATCAGCTTGGTGGAGCTGACAAGGCAACTCCAAAAACAGTGATGAAACTCATGGGAATTCCCGGGCTTACCTTATACCATCTGAAGAGCCATCTTCAGAAGTACAGACTGAGCAAGAATCTGCAAGGACAAAGTAATAACAACGTGCCTCACAAAATTATATGTCACACAAAACCAGGTGCAAGTAGTGTATCTACGGGAGAAAGACCCTCTGAAAGCAATGGCACTCACAATCATATGAACAACAACACTTTAAACACTATTCCGTCTTCTCCTCAGTCGTCGAATAACAAAGATTTACACATAAGTGAGGCACTGCAGATGCAGATAGAGGTGCAAAGAAGGCTAAATGAACAACTAGAGGTGCAAAGACACATGCAGGTGAGGATAGAGGCACAAGGGAAGTACCTGCAAGCAGTGCTGGAGAAAGCTCAAGAAACACTTGGGAAACAGGATTTGGGAGTAGTAGGGCTTGAAGCTGCAAAAGTCCAACTTTCTGAGCTTGTTTCCAAAGTTTCCTCTCAGTGCTTGGAGCTTCAAACCAACAACAACCACTTACCAAATAATAATAATAATGACTGCTCCATGGACAGTAACAGTTGCCTCACATCAGAACAAGAGAATCTAAGGCCCTTCATCAATGGCCACCACCATAAATTCATGTTGGAGAGAAACACCACCACCGCCACCACCAACTTTCTGACGCCATTAGGGAGCAAGAACAATAATAGTAACAGTGCTGAGAGAAGAAGCTATGTAGTGGAGAGAAGTCCAAGTAACTTGTCTATGAGCATTGGACTTGAAAGGGAGACAGAAGCAGCGATGATGATGAGTAATGAGAAAGGTTCTCATCATCATCATCATCATCATCATCAAGATTATACGTTGCCACCTTCTTCTTACTTTTCAGCACCAAGGCTTGACCTTAACGCACGTGATCAGGATCAAAGTCATGAAGCAACTGCTGCAACTTGTAAACAACTGGACTTGAATGGATTCAGTTGGAGCTAA 1206 0.4386 MYHHHHQGKNIHSSSSRMAMSSERHMFLQAAGNGSGGDSGLVLSTDAKPRLKWTPDLHARFIEAVHQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLQGQSNNNVPHKIICHTKPGASSVSTGERPSESNGTHNHMNNNTLNTIPSSPQSSNNKDLHISEALQMQIEVQRRLNEQLEVQRHMQVRIEAQGKYLQAVLEKAQETLGKQDLGVVGLEAAKVQLSELVSKVSSQCLELQTNNNHLPNNNNNDCSMDSNSCLTSEQENLRPFINGHHHKFMLERNTTTATTNFLTPLGSKNNNSNSAERRSYVVERSPSNLSMSIGLERETEAAMMMSNEKGSHHHHHHHHQDYTLPPSSYFSAPRLDLNARDQDQSHEATAATCKQLDLNGFSWS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0222 401 MobiDBLite consensus disorder prediction 1 20 - -
Ahy13g0222 401 Pfam Myb-like DNA-binding domain 50 101 IPR001005 -
Ahy13g0222 401 MobiDBLite consensus disorder prediction 345 366 - -
Ahy13g0222 401 MobiDBLite consensus disorder prediction 123 161 - -
Ahy13g0222 401 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Ahy13g0222 401 MobiDBLite consensus disorder prediction 297 320 - -
Ahy13g0222 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 105 IPR017930 -
Ahy13g0222 401 PANTHER MYB-RELATED PROTEIN 2 4 401 - -
Ahy13g0222 401 Coils Coil 168 188 - -
Ahy13g0222 401 Gene3D - 47 106 - -
Ahy13g0222 401 MobiDBLite consensus disorder prediction 124 161 - -
Ahy13g0222 401 Pfam MYB-CC type transfactor, LHEQLE motif 166 212 IPR025756 -
Ahy13g0222 401 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
Ahy13g0222 401 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 401 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0222 Ahy-Chr13 2313790 2316849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0222 80 400 G2-like Transcription Factor Family AT3G04030 43.370 7.46e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy13g0222 Myb_DNA-binding 1.00E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0222 - - gmx:100810396 422.935