Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0218 ATGGCGAGCCAAAGAATAGGAGGAGACACTGGTTTATCAGAGTCACTGATCACAAGTCATCACCATGCCTCTACTCATGGAGTTCTTCATGGAATCAACACCCCATCATCAATCTTAATGAATGAAGAGGGAGCGTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTGCAAGGAATCAAGACTAGAAATGATGAAGAAGCCAAAGCATCATGGAGGCCTGCAGCAACACTGGAAATGTTCCCTTCATGGCCAATCAGATTCCACCAAACCTCAAGAGGAGGTTGCAAGTCAGGAGGAGGGGATGAAAACACAGACTCAGGATCAGGATCAGGTGTGAACACCAACACCCTTTCAAGCAAATTGGAAACGGAACCCCATCATAATCATTTTCAATCACAAGATTCTCCAATTAGTAGCCACCAACAACAACAAGATCAAGAGGTGCAGCTGGCAACTAGTGATGCCTCAAGAAAAGGGCCATCACCCCAACAAAAGAAAAAAGGAGCGAGTTCCACATCGGAGAAGGCAGTGGATGCAAAGGTGAAGACACTGAGACGGTTGGCACAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTGAGGAAAAAGGCTTATGTGCAGCAACTAGAGTGTAGCAGATTAAAGCTTACTCAGCTGGAAAAGGAGGTTGAAAGAGCAAGATCACAGGTAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCAATGATGTTCGACATGGAGTATGGAAGATGGCTGGAAGATGAAGAGAGGCAGATGGGGGAGGTGAGGAGGGGGCTGGAGGGGGGCATATCGGACGGGGAGATGAGAGTGATAGTGGAGAGTTACATGAGCCACTACGACGACCTGTTCAGGCTGAAGGCGGAGGGTGCCAAGTGGGACGTGTTCCACATCATGAATGGCACCTGGACATCCCCGGCAGAGCGGTGCTTCCTGTGGATGGGTGGTTTCAGGCCGTCAGACCTGGTGGGGTTGCTCATACACCACTTGGAGCCTCTTGCGGAGCAGCAGATCATAGCCATGTACGGACTGAGACACTCATCACAGCAGGCTGAAGACGCTCTTTCTCAGGGGCTTGAGCAGCTCCACCACTCTCTCCTCCACACCATCTCCCTCCCTCAGATGCTTGCTGCCATGGCCAAGCTTTCCAACCTTGAAGCTTTCCTCCTTCAGGCTGATCATCTCAGGCAGCAGACACTTCACCAATTCTGTCGATTTCTCACCATTCGTCAAGCAGCTCGCTGTTTCCTTGTCATTGGAGACTACTATGCTCGTCTTCGCGCCCTTAGTTCTCTTTGGGCCTCCAGGACCCTCATCAACCATCACGATAACTCAACCATGGACTTGCAAACCCTTCAACCTTCTCCGCAAAATCATCTCTCTAATTTCTGA 1416 0.5028 MASQRIGGDTGLSESLITSHHHASTHGVLHGINTPSSILMNEEGAFDFGELEEAIVLQGIKTRNDEEAKASWRPAATLEMFPSWPIRFHQTSRGGCKSGGGDENTDSGSGSGVNTNTLSSKLETEPHHNHFQSQDSPISSHQQQQDQEVQLATSDASRKGPSPQQKKKGASSTSEKAVDAKVKTLRRLAQNREAARKSRLRKKAYVQQLECSRLKLTQLEKEVERARSQVAGGGGGGGGGGGAMMFDMEYGRWLEDEERQMGEVRRGLEGGISDGEMRVIVESYMSHYDDLFRLKAEGAKWDVFHIMNGTWTSPAERCFLWMGGFRPSDLVGLLIHHLEPLAEQQIIAMYGLRHSSQQAEDALSQGLEQLHHSLLHTISLPQMLAAMAKLSNLEAFLLQADHLRQQTLHQFCRFLTIRQAARCFLVIGDYYARLRALSSLWASRTLINHHDNSTMDLQTLQPSPQNHLSNF* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0218 471 ProSiteProfiles DOG1 domain profile. 243 444 IPR025422 GO:0006351|GO:0043565
Ahy13g0218 471 MobiDBLite consensus disorder prediction 131 171 - -
Ahy13g0218 471 MobiDBLite consensus disorder prediction 89 182 - -
Ahy13g0218 471 Pfam bZIP transcription factor 180 222 IPR004827 GO:0003700|GO:0006355
Ahy13g0218 471 Pfam Seed dormancy control 260 334 IPR025422 GO:0006351|GO:0043565
Ahy13g0218 471 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Ahy13g0218 471 SUPERFAMILY Leucine zipper domain 183 226 IPR046347 GO:0003700|GO:0006355
Ahy13g0218 471 MobiDBLite consensus disorder prediction 102 122 - -
Ahy13g0218 471 PANTHER TRANSCRIPTION FACTOR TGA9 65 445 - -
Ahy13g0218 471 Coils Coil 202 229 - -
Ahy13g0218 471 SMART brlzneu 179 232 IPR004827 GO:0003700|GO:0006355
Ahy13g0218 471 Gene3D - 182 232 - -
Ahy13g0218 471 PANTHER TRANSCRIPTION FACTOR TGA9 65 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0218 Ahy-Chr13 2283588 2287292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0218 118 471 bZIP Transcription Factor Family AT1G08320 55.376 1.41e-133 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy13g0218 DOG1 3.70E-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0218 K14431 - gmx:100101904 528.094