Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0208 ATGGCGGAGGAGGCGAAACCGGTGCCGGAGGCGGAAGAGCTTCCCAGGACTATCGTGCGCCGCATCGTGAAGGATAAGCTATCCCGATGCTCCGAAGACGGAGACATATCCGTCAACAAAGACGCACTTCTTGCATTCTCTGAAAGTGCCAGGATCTTTATCCACTACATTTCCGCAACAGCTAATGACATTTGTAAGGAGTCAAAGAGGCAGATAGTCAATGCTGATGATATTTTCAAAGCTCTTGAAGAAACTGACTTCTCTGAGTTTATCCGCCCTCTTAAAGCTTCTCTTGAAGACTTCAGGAAGAAGAATGCTGGGAAGAAAGCAGCAGTGTCAAAAGAAAAGGAAAGTGGGAAGAACAAGAAAAGGAAGGTGGAAGGGGAGCCATCTGGTAAAGTCAAATCTGATAATGGGGAGTCACCCGAGAAAGGGGAGAGTGGTGATGCCGAATGA 456 0.4759 MAEEAKPVPEAEELPRTIVRRIVKDKLSRCSEDGDISVNKDALLAFSESARIFIHYISATANDICKESKRQIVNADDIFKALEETDFSEFIRPLKASLEDFRKKNAGKKAAVSKEKESGKNKKRKVEGEPSGKVKSDNGESPEKGESGDAE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0208 151 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 2 144 - -
Ahy13g0208 151 Gene3D Histone, subunit A 4 150 IPR009072 GO:0046982
Ahy13g0208 151 SUPERFAMILY Histone-fold 14 135 IPR009072 GO:0046982
Ahy13g0208 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 82 IPR003958 -
Ahy13g0208 151 MobiDBLite consensus disorder prediction 104 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0208 Ahy-Chr13 2202451 2204253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0208 14 119 CCAAT-HAP3 Transcription Factor Family AT5G47640 29.245 2.89e-11 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Ahy13g0208 CBFD_NFYB_HMF 1.50E-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0208 K02326 - gmx:100306382 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0208 13 2202451 2204253 Ahy13g0208 13 2202451 2204253 ECH