Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0196 TCCGCCCAGGCTTCTTACAGGAAAGCTGGTGTTATTGCGGAACAAACGATCAGTTCAATTAGGACAGTGTTTTCTTTTGTTGCGGAAAGGCAATTGGCAGCAAAATATGCTCAATTACTACAAAAATCAGCCCCAATAGGCGCAAAAATTGGTTTTGCCAAGGGTGCAGGCATGGGCATTATCTATTTAGTAACATATTCGACATGGGCCTTGGCATTTTGGTATGGCTCCATCTTAATTGCCACGAACAAACTTGATGGGGGTGCAGCTATTGCTTGTTTCTTTGGTGTCAATGTAGGAGGAAGAGGTCTAGCATTGGCGCTGTCATATTTTGCACAATTTGCACAAGGTACTGTTGCAGCAAGTCGTGTATTCTCTGTTATAGACAGAATTCCTGAGATTGATCCATATAGCCCTGACGGAAGGAAGCTTACTGTTGTCCGTGGTAGAATTGAGTTAAAAAATGTTAGTTTTGCATACCCATCTCGTCCTGATTCTCTGATACTTCATTCCCTTAATTTAGTATTTTCATCGACAAAAACTTTGGCACTGGTTGGTGCTAGTGGAGGGGGCAAGTCGACTATATTTGCTCTGATAGAGCGGTTCTATGACCCTATTGAAGGGACGATAACCTTGGACGGCCATGATTTGAGGACGTTGCAAGTCAAGTGGCTAAGAGGTCAAATTGGGATGGTTGGTCAAGAGCCAATCCTCTTTGCAACCTCCATACTAGAAAACGTTATGATGGGGAAAGATAATGTCACTAAGGAGGAGGCAATTGCTGCTTGCATTGCTGCAGATGCTCACAATTTCATATCTAACTTACCACTTGGCTATGACACTCAGGTCGGAGATAGGGGCACAAAACTATCAGGTGGTCAAAAGCAGAGAATCGCACTGGCTCGAGCAATAATCAAAGATCCTAAAATCCTTCTTTTAGACGAACCTACCAGCGCTCTTGATGCTGAGTCAGAGTCTGCAGTCCAACGAGCCATGGACAAGATTTCTGTGGGTCGAACAACCATTGTCATTGCTCATAGGATAGCTACTGTAAAGAATGCTCATGCCATCGTGGTCCTCGAAAATGGTACTGCCATTGAGATGGGTAACCATCTCCAGCTTATAGGGAAAGGGGGAACCTACTATAACCTTGTCAAACTCGCCAGCGAGGCCATATCAAGGCCTCTCTCTAATGAACATGACATGCAAAAATCCAATGACGACTCAATTGCTGATGTATCAAGATATGCAGCAGATATCTCGAGGCCTAAACATTTAAAATACGCTCAGGAGAAAAAAGTAGAGATCGAAGACGAGCCAAACAAAATGCCAAAAAAATTTAGACTTTCTGAGATATTGAAATTGCAAAAGCCAGAGCTTTGGATGCTACTTTTAGGATTCTTTCTGGGTATGTTTGCAGGCGCTTTTCTGTCTCTTTTTCCTTTGGTTTTAGGCATATCTCTTGGGGTATATTTTGATGATGACACTGATAAGATGAAGAGAGATGTTGGACACCTTTGTTTAGCACTTGTTTGTCTTGGATTCGGTTGTATTCTTTCCATGACAGGACAACAAGGATTTTGTGGTTGGGCAGGATCAAAGCTTACACTAAGGGTTAGAAACCTCTTGTTCCAGTCCATCTTGAAACAAGAACTCGGGTGGTTTGATTTTGATAAAAACTCGACTGGAGTGTTAGTGTCAAGGCTCTCCATTGATTGTGTCAGCTTTCGTTCAATACTTGGTGATCGATTCTCAGTCCTTCTTATGGGGTTGAGTTCAGCAGCCGTCGGTCTTGGTGTTTCCTTTGTCATCAATTGGAAACTAACCCTTTTGGCGGCTGCTGTTACTCCCTTTACTCTTGGTGCAAGTTATGTAAGCTTGCTTATAAATATTGGACCACATGTTGATAACAATGCATATGCCAAAGCTAGCAATATTGCTTCTGGTGCAGTATCAAACATAAGAACGGTTACCACGTTTTCTGCCCAGGAAATATTAATTAAGTCCTTTGATCAAGCCTTATCAGAACCTCAAAGGAAATCATTGAAAAGTTCGCACATTCAAGGTCTAACATTTGGGTTCTTTCAAGGTGCCATGTATGGAGCGTACACCTTGGTTCTTTGGTTTGGTGCCAGACTTGTAGATCGTAGCGAAGCGAAGTTGGGAGATGTTTTTAAGATCTTTCTCATTCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCTGGTTTAGCACCAGATACTTCTATGGCGGCCACAGCAATCCCTTCTGTTCAAGATATCATAAACCGGAGGCCGCTGATAGGGAACGATAAGTCAATAAGAAGCAAGAAAGTAGAAGATCGATTAAAGTCGCCTTTCAAAATAGAATTCAAAATGGTCACATTTGCATACCCATCTAGGCCTGCAGTTACAGTGCTAAGGGATTTCTCTTTGAAGGTCAAAGGTGGAAGCACCGTGGCCTTGGTAGGACCCAGTGGATCAGGAAAATCAACCATCATATGGTTGATACAGAGGTTCTATGATCCAAATAAAGGAAAAGTGATGCTAAGTGGGGTAGACCTTATGGAAATTGATGTTAAGTGGTTAAGGAGGCAAATGGCTTTAGTGGGTCAAGAACCAGCACTGTTTTCTGGGAGTATAAGGGAGAACATTACCTTTGGGGACCCAAATGCGTCATGGGCTGAAATTGAAGCAGCTGCAAAAGAAGCTTACATCCACAAATTCATTAGTGGCCTTCCTCAAGGTTATGAGACCCAGGTTGGTCAAAGCGGGGTCCAACTATCAGGTGGCCAAAAACAACGAATTGCAATAGCAAGGGCTATACTGAAGAAATCAAGGGTGGTTCTACTTGATGAAGCAAGCAGTGCTTTGGACTTGGAGTCAGAGAAACACATCCAATATGCCCTTAAGAAAGTTTCCAAGGAAGCAACAACCATCATTGTAGCCCATCGTCTATCGACAATTAGAGAAGCTGACAACATAGTGGTTATGAAAGATGGGGGAGTAGCAGAGTATGGAAGTCATGACACACTCATGACTTCCCATCAAAATGGTCTGTATGCTAGCCTAGTTCGATCTGAGACCGAAGCCAATGCCTTTGCTTGA 3108 0.4289 SAQASYRKAGVIAEQTISSIRTVFSFVAERQLAAKYAQLLQKSAPIGAKIGFAKGAGMGIIYLVTYSTWALAFWYGSILIATNKLDGGAAIACFFGVNVGGRGLALALSYFAQFAQGTVAASRVFSVIDRIPEIDPYSPDGRKLTVVRGRIELKNVSFAYPSRPDSLILHSLNLVFSSTKTLALVGASGGGKSTIFALIERFYDPIEGTITLDGHDLRTLQVKWLRGQIGMVGQEPILFATSILENVMMGKDNVTKEEAIAACIAADAHNFISNLPLGYDTQVGDRGTKLSGGQKQRIALARAIIKDPKILLLDEPTSALDAESESAVQRAMDKISVGRTTIVIAHRIATVKNAHAIVVLENGTAIEMGNHLQLIGKGGTYYNLVKLASEAISRPLSNEHDMQKSNDDSIADVSRYAADISRPKHLKYAQEKKVEIEDEPNKMPKKFRLSEILKLQKPELWMLLLGFFLGMFAGAFLSLFPLVLGISLGVYFDDDTDKMKRDVGHLCLALVCLGFGCILSMTGQQGFCGWAGSKLTLRVRNLLFQSILKQELGWFDFDKNSTGVLVSRLSIDCVSFRSILGDRFSVLLMGLSSAAVGLGVSFVINWKLTLLAAAVTPFTLGASYVSLLINIGPHVDNNAYAKASNIASGAVSNIRTVTTFSAQEILIKSFDQALSEPQRKSLKSSHIQGLTFGFFQGAMYGAYTLVLWFGARLVDRSEAKLGDVFKIFLILVLSSFSVGQLAGLAPDTSMAATAIPSVQDIINRRPLIGNDKSIRSKKVEDRLKSPFKIEFKMVTFAYPSRPAVTVLRDFSLKVKGGSTVALVGPSGSGKSTIIWLIQRFYDPNKGKVMLSGVDLMEIDVKWLRRQMALVGQEPALFSGSIRENITFGDPNASWAEIEAAAKEAYIHKFISGLPQGYETQVGQSGVQLSGGQKQRIAIARAILKKSRVVLLDEASSALDLESEKHIQYALKKVSKEATTIIVAHRLSTIREADNIVVMKDGGVAEYGSHDTLMTSHQNGLYASLVRSETEANAFA* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0196 1035 CDD ABC_6TM_Pgp_ABCB1_D2_like 453 768 - -
Ahy13g0196 1035 Gene3D ABC transporter type 1, transmembrane domain 3 627 IPR036640 GO:0005524|GO:0016021
Ahy13g0196 1035 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 789 1025 IPR003439 GO:0005524
Ahy13g0196 1035 SUPERFAMILY ABC transporter transmembrane region 3 136 IPR036640 GO:0005524|GO:0016021
Ahy13g0196 1035 SMART AAA_5 178 379 IPR003593 -
Ahy13g0196 1035 SMART AAA_5 816 1002 IPR003593 -
Ahy13g0196 1035 CDD ABC_MTABC3_MDL1_MDL2 789 1026 - -
Ahy13g0196 1035 Pfam ABC transporter transmembrane region 463 734 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy13g0196 1035 Pfam ABC transporter transmembrane region 3 97 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy13g0196 1035 ProSitePatterns ABC transporters family signature. 290 304 IPR017871 GO:0005524
Ahy13g0196 1035 ProSitePatterns ABC transporters family signature. 928 942 IPR017871 GO:0005524
Ahy13g0196 1035 Gene3D ABC transporter type 1, transmembrane domain 636 784 IPR036640 GO:0005524|GO:0016021
Ahy13g0196 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 386 IPR027417 -
Ahy13g0196 1035 PANTHER ABC TRANSPORTER B FAMILY 3 1034 - -
Ahy13g0196 1035 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 464 750 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy13g0196 1035 SUPERFAMILY ABC transporter transmembrane region 444 766 IPR036640 GO:0005524|GO:0016021
Ahy13g0196 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 1026 IPR027417 -
Ahy13g0196 1035 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 387 IPR003439 GO:0005524
Ahy13g0196 1035 CDD ABC_MTABC3_MDL1_MDL2 151 388 - -
Ahy13g0196 1035 Pfam ABC transporter 169 318 IPR003439 GO:0005524
Ahy13g0196 1035 Gene3D - 787 1029 IPR027417 -
Ahy13g0196 1035 Gene3D - 149 409 IPR027417 -
Ahy13g0196 1035 Pfam ABC transporter 807 955 IPR003439 GO:0005524
Ahy13g0196 1035 PANTHER - 3 1034 - -
Ahy13g0196 1035 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 116 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0196 Ahy-Chr13 2067400 2073183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0196 494 1035 Calmodulin-binding Proteins AT2G36910 36.765 1.94e-101 345