Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0184 ATGGCGGAACCAAACGGCGACGTTTTCCAGTGGCTGAAGTCGATGCCGTTAGCGCCGGAGTACAGGCCGACGCTAACGGAATTCCAAGATCCGATCGCCTACATTTTCAAGATCGAGAAGGAAGCTTCCAAGTACGGAATCTGCAAGATCATACCGCCGTTTCCACCGCCGCCGAGGAAGGTTGCAATTGCCAACTTCACTCGCTCGCTGACTAAGCCCGACGAGCCTAACTCAAAGCCTACATTCACCACTCGCCAGCAGCAGATCGGGTTCTGCCCCCGCCGGCCCAGGCCCGTTCAGAGGCCCGTGTGGCAAAGCGGTGAGAACTACACTTTTCAGGAATTCGAGGCTAAGGCCAAAGCATTCGAGAAGAGCTACCTCAAGAAGCATCATCTTCACCACCAAGGCCACCGGAAGGGAGGAGGAGCTGGTGGTGGTTCCGGTGGCCTAGGGCCTCTCGAGGTGGAGACGCTGTTCTGGAAGGCGACCGTTGACAAGCCGTTCTCGGTGGAGTATGCGAACGACATGCCGGGCTCGGCGTTCAGCCGGAAATGCAGGGAGGAGTGTGCGGCGGCGCTAGCGGAGTCGGCGTGGAATATGAGGGAGATTTCGAGGGCGAATGGTTCGTTGTTGAGGTTCATGAAGGAGGAGATACCTGGTGTTACTTCTCCTATGGTGTATTTGGCTATGTTGTTCAGCTGGTTCGCTTGGCATGTTGAGGACCATGACCTCCATAGCTTGAATTACCTTCACATGGGTTCTGGGAAGACCTGGTATGGCGTGCCGAGAGATGCAGCCGTGGCGTTCGAAGATGTTGTTAGGGTTCATGGATATGGCTCTGAGATTAATCCTCTTGTTACTTTTTCTACTCTTGGCGAGAAAAACACAGTGATGTCACCTGAAGTATTGATAAACGCAGGTGTTCCATGCTGCAGGTTAGTTCAAAATGCTGGGGAATTTGTTGTGACTTTTCCAAGAGCTTATCATACAGGGTTTAGTCATGGTTTTAATTGTGGAGAGGCAGCCAACATTGCAACGCCTGAATGGTTGAGAGTTGCAAAAGATGCTGCTATTCGGAGGGCTTCAGTAAATCATTCTCCTATGGTTTCACATTTCCAGTTACTTTATGACCTAGCCTTAGCTTTGTGTTCTAGAATTCCTGAGAGTATCACTGCTGAACCACGGAGTTCTCGCCTTAAAGATAAGAAGAGGGGTGAAGGGGAAACTGTAATTAAAGAACTATTTGTCCAGGATGTGTCACAGAACAATGATCTGCTTCAAGAACTCAGCAAAGGATCTGAGATAATACTTCTACCTCGTAGCTCATTTGACATTTCTCTTTGCTCAAAATTACGTTCTGGATCCAAACAGCGAAAAGTGAACTCTCGATTTTCCCTTGGTGCATGCAACTCCGAGGAAATGAATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGCGTTCAGCATGAACAGAGGAATCAAGCAAGAAGGTTCCCTTTCTATAAAAGACAAGATTACTTCATTGTGTGAAAGGAGCATGATTTCTTCATATGATGTAAATGGCAACATCTGCTCTTCAAGTTCCAAGCCACTTCAAGGTGACAATGAAAGAGAAAGTGGTGAAGGGGATGGATCGCCAGATAAGAGACTTTTTTCATGTGTCACATGCGGAATATTGTGCTTTCCTTGTGTAGCTATTGTACAGCCTAGAGAATCTGCTGCTAGATATCTCATGTCAGCTGATTGTAGTTTCTTTAACGATTGGGTCGTTGGTTCTGGAGTGTCTAGCAAAAAGTTTATTGTCCATGAAGAAGCGGCTTTTCCTGAATCAAGTATGTATGCAGGGTGGACAGAAAAGAAGACCCAAAATGGATTGTATCAGGATCCTGTTCAATCTGCCCAGTATCAGCTACTGACTGCTGAGCGTAATTATGCGGAGTCCCTTAATTCTGATAGAGGAAAAAGCAATACAGCTCTTGCATTGTTGGCTTCAACATATGGAAATTCTTCTGACTCTGAGGAAGAGCAGGGTGACTCAGATATTGTAGTTGATGGTCATGAATCACCTGTGATTAATGCCACATTAGGAGGATCACCATCTAATTTTCAAGATGCCTGTGCTATTCCCCCGACTGGACCTGATAGCAGAAATGATTTTAGTCATCAATCTTTTGACCACTCTTTAGAAAAACAGGATTCTGATACTGCTTCAGGGCTTGCATTAAAAAATATGAGGGCAATGTATACCAATGATACTGAAAAAGCATTGTTGGGCAAGGCTATGGTTCCCAATGATGATAAAAATGCCTCTGTGATCCCACAAGGTGATGAAGACTCATCTAGAATGCATGTCTTCTGTCTGGAGCATGCTGTAGAAGCAGAGCAGCAACTTCGCCCAATAGGTGGAGCCCACATAATGCTCCTATGTCATCCAGATTTCCCCAAGATAGAGGCTGAAGCTAAGCTTGTAGCAGAAGATCTTGGGATTGATTACCTGTGGAAGAAGATTGAGTACAGGCATTCCAGCAAGGAGGATGAGGAGAGGATCCAGGTAGCCCTGGATAGTGAGGAAGCTATTCCTGGGAATGGGGACTGGTGTGTGAAGCTGGGAATCAATCTTTTCTACAGTTCAACTCTTAGCCGTTCTCCTCTTTACAGTAAGCAGATGCCTTACAATTCTGTCATATATTATGCATTTGGCCAAAGCTCTCCAGGAAGTTCACCATTAGAACCAAAGGTCTATCAGAGAAGGGTTAACAAGCAGAAAAAGATAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAGTCAGGTACATCCTCTTTTGGCCAAAAGAGATTCTGAAGATGTTGAAGATGAGAAAAGCTTACATGGGTGGGGATTACATGATGAGAAAATAGAGAGATCAGGAAGCATCCCTAAAAGCGAAACTAGTGCCAGAAAATCAGGTAAGAAGCGGAAAATGACTATTGAGAATGGAAGAGCCAGGAAAGGCAGTTTTGCTGAGAGAGATGTGGATTTGGATAATCCAACTGAAGACAAACCTAACCAACAGCTGAGGAGGACTCTTAGAAGTAAGCAAGCCAGGGATATTGAGAGTGAAGGTGCTGATTTGGAAGGGGATTATTCTCCCCCATATCATCATAGAAAACCTTTAAGTGACCAAACAAATTGCACAGGAAGTGATGCTGTTTCTGATGATTCACTTGATGATAAATTTATTGACAATGATGTGCTTTCGGATGATACAATGGTCTATGATTCTGATTGCCATCAGAGATTTGAACATAGCAGCATGCAAGTTGAAGACATAGAAGATGCAGTTTCTGAGGATTCATTGGATGACAGTTCTCTTCAGCTTCATAGGAAGAATTCTAAAAGCAAGCATGCCAGATACATTAGAAAAGGCAGATGCATTGCTGAGAAAGAGGAAATGATGTCTGATGACCAATTGGAGCCACACAAGAAGAAGAAGCAACAGAGGAATCCTAAAAGCAGGCAAGCAAAATACCTTGCAAGAGAAGATGCTATATCACATGGTCAATTGGAGGGACATTGTCGCAAGTATAGAAAGACTCCTAAAGGTAGACTGGCCAAATATGTAGCAGGGGAAGATGTATCATCTGATGAGCAATTGGAGAATTACAGTCGGAAGCAGCAAACAAGTCTTCCTAAAAGGCGGAAAAACAAAGGTGTATTGACTGATGACCAATTGGAGGACCATTTTCAGAAGCAGCAAAAGAGTGTTTCTAGGAGAAGGCAAAACAAAGGCATTGAAAGAGGGGTTAAAGACGAAATGTCTGATGACCAATTAGAGGATCACGTTCAGAAGCAGCAAACTAGTGTTTCTAGGAGGAGGCGAAACAAACAAATTGAAAGAGAAGATGTGATGTCTGATGATGAAATGGAGGATCACATTCAGAAGCAGCGGAGTAGTATTCCTAGAAATAGGCAAAACAGTAATTCTCATCTGGTCCATAAAACTCCTAAACGAAAGCAAGCGAAATGCGTTGATGATGATGATGGTGATGATGATGATGTAAATTCTGATGATGAAGTGGAAGATGATTCTCAGCAGAAGCAGCAGAGAACTCTTAGAAGTAAGCAATCAAAACCAATGACACTTAAGCAGATGAAGCAAGCTCGCTCTCTCCAAATGAAAAATCAGACATCCCGGCCTGTAAAACGAGGTGCTCAGACACTTAAGAAATTAAAGGCATCTCAGATGCGGAATAAGCAATCTGGTAAATCCAGAGAGTTTAGTTTGAAAATGGAAGAGGGGGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGCCCCAAAAGTCGAGGAGTCTGATGGAATATCAAAAGAAAAGCAAACCAAAAAGAAAAGGGTGAAGAATGCTACATCTGCAAAGGCAGCTAGCAATGCTAAAGTGAAGGATGAGGAAAATGAATTCCAGTGTGACATTGATGGCTGCACCATGAGTTTTGGGTCAAAACAGGAGCTGATGCATCACAAGAGAAATATATGTCCTGTAAAAGGTTGCGGGAAGAAGTTTTTCTCGCACAAATATCTGGTGCAGCACCGACGAGTTCACGAGGATGACCGCCCATTGAAGTGCCCTTGGAAGGGCTGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACAGAACATATTCGAGTCCACACTGGTGCGCGACCATATGTATGTGCCGAGCCAGGCTGTGGGCAAACATTCAGATTTGTGTCTGATTTCAGTCGCCATAAGCGTAAGACTGGGCACTCAACAAAGAAGAGTCGCTAA 4794 0.4462 MAEPNGDVFQWLKSMPLAPEYRPTLTEFQDPIAYIFKIEKEASKYGICKIIPPFPPPPRKVAIANFTRSLTKPDEPNSKPTFTTRQQQIGFCPRRPRPVQRPVWQSGENYTFQEFEAKAKAFEKSYLKKHHLHHQGHRKGGGAGGGSGGLGPLEVETLFWKATVDKPFSVEYANDMPGSAFSRKCREECAAALAESAWNMREISRANGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEDVVRVHGYGSEINPLVTFSTLGEKNTVMSPEVLINAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASVNHSPMVSHFQLLYDLALALCSRIPESITAEPRSSRLKDKKRGEGETVIKELFVQDVSQNNDLLQELSKGSEIILLPRSSFDISLCSKLRSGSKQRKVNSRFSLGACNSEEMNSSKGFVSDDLAFSMNRGIKQEGSLSIKDKITSLCERSMISSYDVNGNICSSSSKPLQGDNERESGEGDGSPDKRLFSCVTCGILCFPCVAIVQPRESAARYLMSADCSFFNDWVVGSGVSSKKFIVHEEAAFPESSMYAGWTEKKTQNGLYQDPVQSAQYQLLTAERNYAESLNSDRGKSNTALALLASTYGNSSDSEEEQGDSDIVVDGHESPVINATLGGSPSNFQDACAIPPTGPDSRNDFSHQSFDHSLEKQDSDTASGLALKNMRAMYTNDTEKALLGKAMVPNDDKNASVIPQGDEDSSRMHVFCLEHAVEAEQQLRPIGGAHIMLLCHPDFPKIEAEAKLVAEDLGIDYLWKKIEYRHSSKEDEERIQVALDSEEAIPGNGDWCVKLGINLFYSSTLSRSPLYSKQMPYNSVIYYAFGQSSPGSSPLEPKVYQRRVNKQKKIVAGKWCGKVWMSSQVHPLLAKRDSEDVEDEKSLHGWGLHDEKIERSGSIPKSETSARKSGKKRKMTIENGRARKGSFAERDVDLDNPTEDKPNQQLRRTLRSKQARDIESEGADLEGDYSPPYHHRKPLSDQTNCTGSDAVSDDSLDDKFIDNDVLSDDTMVYDSDCHQRFEHSSMQVEDIEDAVSEDSLDDSSLQLHRKNSKSKHARYIRKGRCIAEKEEMMSDDQLEPHKKKKQQRNPKSRQAKYLAREDAISHGQLEGHCRKYRKTPKGRLAKYVAGEDVSSDEQLENYSRKQQTSLPKRRKNKGVLTDDQLEDHFQKQQKSVSRRRQNKGIERGVKDEMSDDQLEDHVQKQQTSVSRRRRNKQIEREDVMSDDEMEDHIQKQRSSIPRNRQNSNSHLVHKTPKRKQAKCVDDDDGDDDDVNSDDEVEDDSQQKQQRTLRSKQSKPMTLKQMKQARSLQMKNQTSRPVKRGAQTLKKLKASQMRNKQSGKSREFSLKMEEGEEGGPSTRLRKRAPKVEESDGISKEKQTKKKRVKNATSAKAASNAKVKDEENEFQCDIDGCTMSFGSKQELMHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKSR* 1598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0184 1597 Gene3D Cupin 11 366 - -
Ahy13g0184 1597 Coils Coil 1461 1481 - -
Ahy13g0184 1597 ProSiteProfiles JmjC domain profile. 192 361 IPR003347 -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 1051 1065 - -
Ahy13g0184 1597 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 1278 1588 - -
Ahy13g0184 1597 ProSitePatterns Zinc finger C2H2 type domain signature. 1567 1591 IPR013087 -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 1135 1157 - -
Ahy13g0184 1597 ProSiteProfiles Zinc finger C2H2 type domain profile. 1505 1534 IPR013087 -
Ahy13g0184 1597 PANTHER LYSINE-SPECIFIC DEMETHYLASE 5 1185 - -
Ahy13g0184 1597 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1278 1588 - -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 1168 1189 - -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 689 732 - -
Ahy13g0184 1597 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 5 1185 - -
Ahy13g0184 1597 ProSiteProfiles Zinc finger C2H2 type domain profile. 1565 1596 IPR013087 -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 979 1049 - -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 1110 1474 - -
Ahy13g0184 1597 Gene3D Classic Zinc Finger 1503 1589 - -
Ahy13g0184 1597 SMART JmjN_1 17 58 IPR003349 -
Ahy13g0184 1597 SMART c2h2final6 1505 1529 IPR013087 -
Ahy13g0184 1597 SMART c2h2final6 1535 1559 IPR013087 -
Ahy13g0184 1597 SMART c2h2final6 1565 1591 IPR013087 -
Ahy13g0184 1597 SMART c2h2final6 1482 1504 IPR013087 -
Ahy13g0184 1597 SMART cupin_9 192 361 IPR003347 -
Ahy13g0184 1597 ProSiteProfiles JmjN domain profile. 18 59 IPR003349 -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 1340 1354 - -
Ahy13g0184 1597 ProSitePatterns Zinc finger C2H2 type domain signature. 1537 1559 IPR013087 -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 962 1074 - -
Ahy13g0184 1597 Pfam JmjC domain, hydroxylase 225 343 IPR003347 -
Ahy13g0184 1597 SUPERFAMILY beta-beta-alpha zinc fingers 1505 1541 IPR036236 -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 1364 1397 - -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 1417 1455 - -
Ahy13g0184 1597 SUPERFAMILY Clavaminate synthase-like 103 357 - -
Ahy13g0184 1597 MobiDBLite consensus disorder prediction 1229 1312 - -
Ahy13g0184 1597 ProSiteProfiles Zinc finger C2H2 type domain profile. 1535 1564 IPR013087 -
Ahy13g0184 1597 ProSitePatterns Zinc finger C2H2 type domain signature. 1507 1529 IPR013087 -
Ahy13g0184 1597 Pfam jmjN domain 19 52 IPR003349 -
Ahy13g0184 1597 SUPERFAMILY beta-beta-alpha zinc fingers 1545 1589 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0184 Ahy-Chr13 1954548 1963422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0184 1218 1596 C2H2 Transcription Factor Family AT3G48430 40.758 1.96e-71 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy13g0184 JmjC 4.20E-36 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0184 13 1954548 1963422 Ahy13g0184 13 1954548 1963422 ECH