Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0173 ATGGCTTCACAAAATCCTATCTTCTTCTTGCTCTTACTCTTGTTATTCTTCTTCTTCTCCTCTTCAATCATCAAAGCCAAGCTTGATCTCCACCCTTCAGACCTCACCGCCTTTAAAACCCTCCAAAGAGACCTTGGTCTCAATGCACTTTTAGTCAACGGTCAACGCTTCCACCCATGCACCATCGATGGTGTGTTCTGCGAGAGAAGGCTCTCCACCAACGACACCGCCACAGCCACCTACGTCCTCCGCATCACGCGCCTTCTTTTCACCTCCAAGAATCTCAATGGAACCCTCTCTTCCGCCATTGGACACCTCACTGAGCTTAAAGAACTCTCTTTATCTGATAACCACCTCGTTGACCGCATCCCAAACTCCATAGTCAACCTCAAGAAGCTCGAAATCCTCGACCTCCGTGGCAACGGCTTCTCCGGCGAAGTCCCGCCTCGCCTTTCTTCGCTCGCAAGGCTCCGAGTCCTCGATGTCTCCTCCAACAAACTCTCCGGCAACCTCAACTTCCTCAAGTATTTTCCGAACTTGGAAAAGCTTAACGTCGCCGACAACCTCTTCGTTGGTCGTGTCCCGGTTTCCGTTCGCTCGTTTCGGAACCTCAGACACTTCAACTTCTCCGGCAACAGTTTCCTCGAAGGCTCGACGCCGATTGTCCCACGACGCTTCATCTTCGCCGAGGACGACGGAGAGAGCAACGACGGCATAACCGCTCTCGCGCCATCTCCGAGATCAAACAAAAGGAGGAGGAGGAGCTACTTTCCCAGCGCTTCTTCTCCGGCTCCCGGACCGGCACCCAACCACCATCACCACCACAATCACAGGAGAAAGATTCTCGGATGGATACTCGGTTTTCTTGCCGGAGCATTTGCCGGAATAATATCCGGTTTCATATTCTCATTGCTTTTCAAACTGACAAAGGCGTTACTGAAAAGAGGAGGCAAACGCGCCGGCGGCCCTGATATCTTCAGTCCTCTGATCAAGAAAGCCGAAGATTTGGCATTCTTGGAGAAAGAAGATGGTTTGGCGAACTTGGAACTCATCGGAAAAGGTGGCTCCGGCGAGGTTTACAAGGCGGAGTTGCCAGAAAGCGACGGAAAAATGATTGCCATAAAAAAAATCATCCAACCACCGAAGGATGCAACTGAAATGGAAGAAGAAGAAAGCAGAGACTTACACAAAAAAATGAGACAAATCCGATCAGAGATCAACACAGTCGGCCATATCAGACACCGGAATCTGTTACCCCTTCTTGCTCATGTTTCCCGCCCTGATTGCCACCTCTTGGTTTACGAATACATGAAGAATGGAAGCTTACAAGATTTGTTAAACAAAATTCAAGATGGAAATCAGGAACTGGATTGGTTATCAAGGCACAAGATCGCCATTGGAGTTGCTTCTGGACTTGAGTACCTTCACATGAGTCATAGTCCAAGAATCATTCACAGAGATCTCAAACCAGGAAACATTCTTCTTGATGATGATATGGAAGCTAGGATCTCCGATTTCGGTCTTGCAAAAGCAATGCCTGATGCTCAAACTCACATTACTACTTCCAAAGTTGCTGGTACAGTTGGTTATATTGCACCAGAGTATCACCAGATTCTTAAATTCACTGATAAGTGTGACATTTTCAGCTTTGGGGTGGTGCTTGGAGTTTTAGTGACGGGAAAACTTCCCTCTGATGACTTCTTCCAACACACGGATGAGATGAGTATAGTGAAATGGATGAGGAAGGTTATCATCTCGGAGACTCCAAAGGAAGCCATTGATGAGAAGCTTCGTGGGAATGGTTTTGAGGAGCAAATGCTTCTTGTTCTTAAGATTGCATGCTTTTGCACTATGGATGATCCTAAGGAGAGACCTAATAGCAAGGAAGTTAGGTGTATGTTAACTCAAATCAAGCATGATGACATGAATCTCTCTTAA 1938 0.4727 MASQNPIFFLLLLLLFFFFSSSIIKAKLDLHPSDLTAFKTLQRDLGLNALLVNGQRFHPCTIDGVFCERRLSTNDTATATYVLRITRLLFTSKNLNGTLSSAIGHLTELKELSLSDNHLVDRIPNSIVNLKKLEILDLRGNGFSGEVPPRLSSLARLRVLDVSSNKLSGNLNFLKYFPNLEKLNVADNLFVGRVPVSVRSFRNLRHFNFSGNSFLEGSTPIVPRRFIFAEDDGESNDGITALAPSPRSNKRRRRSYFPSASSPAPGPAPNHHHHHNHRRKILGWILGFLAGAFAGIISGFIFSLLFKLTKALLKRGGKRAGGPDIFSPLIKKAEDLAFLEKEDGLANLELIGKGGSGEVYKAELPESDGKMIAIKKIIQPPKDATEMEEEESRDLHKKMRQIRSEINTVGHIRHRNLLPLLAHVSRPDCHLLVYEYMKNGSLQDLLNKIQDGNQELDWLSRHKIAIGVASGLEYLHMSHSPRIIHRDLKPGNILLDDDMEARISDFGLAKAMPDAQTHITTSKVAGTVGYIAPEYHQILKFTDKCDIFSFGVVLGVLVTGKLPSDDFFQHTDEMSIVKWMRKVIISETPKEAIDEKLRGNGFEEQMLLVLKIACFCTMDDPKERPNSKEVRCMLTQIKHDDMNLS* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0173 645 SUPERFAMILY Protein kinase-like (PK-like) 341 637 IPR011009 -
Ahy13g0173 645 SMART serkin_6 345 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0173 645 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 639 - -
Ahy13g0173 645 SUPERFAMILY L domain-like 57 216 - -
Ahy13g0173 645 Pfam Protein kinase domain 347 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0173 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Ahy13g0173 645 MobiDBLite consensus disorder prediction 237 275 - -
Ahy13g0173 645 Gene3D Transferase(Phosphotransferase) domain 1 437 644 - -
Ahy13g0173 645 Gene3D Phosphorylase Kinase; domain 1 334 436 - -
Ahy13g0173 645 Pfam Leucine Rich Repeat 109 130 IPR001611 GO:0005515
Ahy13g0173 645 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 12 639 - -
Ahy13g0173 645 ProSitePatterns Protein kinases ATP-binding region signature. 351 376 IPR017441 GO:0005524
Ahy13g0173 645 Gene3D Ribonuclease Inhibitor 34 223 IPR032675 -
Ahy13g0173 645 ProSiteProfiles Protein kinase domain profile. 345 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g0173 645 CDD STKc_IRAK 351 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0173 Ahy-Chr13 1841023 1843240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0173 10 639 Receptor kinase-like Gene Family AT2G31880 61.068 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Ahy13g0173 Pkinase 4.80E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0173 - - aip:107629358 1209.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0173 13 1841023 1843240 Ahy13g0173 13 1841023 1843240 ECH